Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq140 102 8e-20 seq1498 84.2 2e-14 seq103 82.4 7e-14 >seq140 Length=166553 Score = 102 bits (112), Expect = 8e-20 Identities = 80/96 (83%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||| | ||||||||||| |||||||||| |||||| || || ||| ||||| Sbjct 661 ACCAGGGGGTAGCGACTGTTTACCAAAAACACAGGGCTCTGCGAAGTCGCAAGACGACGT 602 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||| ||||||||||||||||| |||||||||| Sbjct 601 ATAGGGTCTGACGCCTGCCCGGTGCTGGAAGGTTAA 566 >seq1498 Length=998 Score = 84.2 bits (92), Expect = 2e-14 Identities = 99/133 (74%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 21 AGGGACTTGCTCC-GTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTAT 79 ||||| || |||| | |||| || || || ||| || || | ||||||||||| Sbjct 744 AGGGATTTACTCCCGAAAGCGTTTGGAGGCCGCAGAGACTAGTGGGTAGCGACTGTTTAC 803 Query 80 TAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGT 139 ||||||||||| | ||| || || ||| || ||||| || ||||||||||||||| Sbjct 804 TAAAAACACAGGTCCGTGCCAAGTCGCAAGACGATGTATACGGACTGACGCCTGCCCGGT 863 Query 140 GCCGGAAGGTTAA 152 || |||||||||| Sbjct 864 GCTGGAAGGTTAA 876 >seq103 Length=5517 Score = 82.4 bits (90), Expect = 7e-14 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| ||||||||||| ||||||||| || |||||| |||||| || ||||| Sbjct 4154 AGGCCCAGGCGACTGTTTAACAAAAACACATGGCTTTGCAAAATCGAAAGATGAAGTATA 4213 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||| |||||||||||| |||||||||| Sbjct 4214 AGGCCTGACACCTGCCCGGTGCTGGAAGGTTAA 4246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476669619487