Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq103 385 1e-104 seq140 315 2e-83 seq1498 293 5e-77 seq9976 118 2e-24 seq552 77.0 7e-12 >seq103 Length=5517 Score = 385 bits (426), Expect = 1e-104 Identities = 301/356 (85%), Gaps = 5/356 (1%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 |||||||| |||||||||||| |||||||||||||| || | |||||||| ||||| Sbjct 4436 TACCCGGCGTCTTCACCGGGACCACAATTTCACCGAGCTCATGGCTGAGACAGCGCCCAG 4377 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 4376 ATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 4317 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATT--GCTCTA 178 |||||||||||||||||||||||||||||||||| |||| ||||||| || | ||| Sbjct 4316 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATTCAATGCTTCGGTTTAACCCTA 4257 Query 179 ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 ||| || |||||||||||||||||||||||| ||||| | ||||| || |||| ||| Sbjct 4256 ACATCCCCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCTTATACTTCATCTTTCGA 4197 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 || ||| | | |||||||||| ||||||||||| ||||||| ||| |||||| ||| Sbjct 4196 TTTTGCAAAGCCATGTGTTTTTGTTAAACAGTCGCCTGGGCCTTTTCACTGCGG-CTGAT 4138 Query 299 ATAG--ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || | || || ||||||||||| ||||||| ||| ||||||||||||||||||| Sbjct 4137 ATTGCTACCAGCGCCCCTTCTCCCGAAGTTACAGGGCCATTTTGCCGAGTTCCTTA 4082 >seq140 Length=166553 Score = 315 bits (348), Expect = 2e-83 Identities = 295/374 (79%), Gaps = 20/374 (5%) Strand=Plus/Plus Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61 |||| |||||||||| |||| | ||||||||| |||||| | ||||||| | || Sbjct 388 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGTCTGCGTTGGAGACAGCGGGGAAG 447 Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 448 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 507 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181 ||||||||||||||||||||||||||||||||| |||| || |||| || Sbjct 508 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATTCAAAGC-----TTGC----ACC 558 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 ||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 559 TCTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACTT 618 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG-CGGCCTGTCAT 300 ||||| ||||||||||||||||||||||||| ||| ||| || | ||| ||| Sbjct 619 CGCAGAGCCCTGTGTTTTTGGTAAACAGTCGCTACCCCCTGGTCTGTGCCACCCTCACAT 678 Query 301 A------GACA----GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCT 350 | ||| || | ||||| || |||||||| | || |||||||||||||| Sbjct 679 ACTTGCGTACATAAGGGTCACGCTTCTTCCGAAGTTACGCGTGCAATTTGCCGAGTTCCT 738 Query 351 TAACAATAGTTCTC 364 | | ||||||| Sbjct 739 TCAACGCAGTTCTC 752 >seq1498 Length=998 Score = 293 bits (324), Expect = 5e-77 Identities = 256/322 (80%), Gaps = 35/322 (11%) Strand=Plus/Minus Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 || |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 997 AAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 938 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTA 178 |||||||||||||||||||||||||||||||||||| |||| || |||| Sbjct 937 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATTCAAAGC-----TTGC---- 887 Query 179 ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 || ||| |||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 886 ACCTCTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGA 827 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT--- 295 ||| ||| |||||||||||| ||||||||||||| ||| |||||||||||| Sbjct 826 CTTGGCACGGACCTGTGTTTTTAGTAAACAGTCGCTACCCACTAGTCTCTGCGGCCTCCA 767 Query 296 -------------GT-----CATAGAC-----AGGCACCCCTTCTCCCTAAGTTACGGGG 332 || | || || |||| ||||||||||| ||||||||||| Sbjct 766 AACGCTTTCGGGAGTAAATCCCTATACGCCGAAGGCCCCCCTTCTCCCGAAGTTACGGGG 707 Query 333 TCATTTTGCCGAGTTCCTTAAC 354 ||||||||||||||||||||| Sbjct 706 GCATTTTGCCGAGTTCCTTAAC 685 >seq9976 Length=1608 Score = 118 bits (130), Expect = 2e-24 Identities = 130/177 (73%), Gaps = 26/177 (15%) Strand=Plus/Plus Query 214 TCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 |||| | ||||||||||||| |||||| ||| |||||||||||| |||||||||||| Sbjct 424 TCAGTCCGTATACATCGTCTTACGACTTCGCACGGACCTGTGTTTTTAGTAAACAGTCGC 483 Query 274 TTGGGCCTATTCTCTGCGGCC---------------------TGTCAT----AGACAGG- 307 || || ||||||||||| |||| | ||||||| Sbjct 484 TTCTCACTGGTCTCTGCGGCCCCACCCAGCTCAGACAGTAAATGTCGTCACCAGACAGGG 543 Query 308 CACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 | ||||||||||| ||||||||||| ||||||||||||||||||||| |||||| || Sbjct 544 CCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCATAGTTATC 600 >seq552 Length=650 Score = 77.0 bits (84), Expect = 7e-12 Identities = 66/82 (80%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | |||| ||||||||| |||||| || ||||||| ||| Sbjct 82 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 23 Query 61 ATCGTTACGCCTTTCGTGCGGG 82 ||||||||||| ||||||| || Sbjct 22 ATCGTTACGCCATTCGTGCAGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062100116352