Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq140 529 5e-148 seq103 412 1e-112 seq196 318 2e-84 seq5 181 3e-43 >seq140 Length=166553 Score = 529 bits (586), Expect = 5e-148 Identities = 425/505 (84%), Gaps = 16/505 (3%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3955 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 3896 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||||||||||||||| |||||||||||| |||||||||| || | | Sbjct 3895 GTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCCCTTGACATCCC--GATCGCGG 3838 Query 121 T----AGAGATAGAGGTTTCCCC---TTCGGG-GGACAGAGTGACAGGTGATGCATGGTT 172 | |||||| ||||||| || || ||| | |||||||||| ||||||| | Sbjct 3837 TTACCAGAGAT---GGTTTCCTTCAGTTAGGCTGGATCG-GTGACAGGTGCTGCATGGCT 3782 Query 173 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGC 232 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3781 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCC 3722 Query 233 TTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAA 291 ||||||||||||||| |||||||||||||||| |||||||||||| || ||| |||||| Sbjct 3721 TTAGTTGCCATCATTCAGTTGGGCACTCTAAGGGGACTGCCGGTGATAAGCCGAGAGGAA 3662 Query 292 GGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAAT 351 |||||||| |||||||| || ||||| |||||| | |||||||||||||||||||||| Sbjct 3661 GGTGGGGATGACGTCAAGTCCTCATGGCCCTTACGGGCTGGGCTACACACGTGCTACAAT 3602 Query 352 GGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAG 411 || ||| ||||||||| ||||||||||| ||| |||| | |||| |||||| Sbjct 3601 GGTGGTGACAGTGGGCAGCGAGACCGCGAGGTCGAGCTAATCTCCAAAAG-CCATCTCAG 3543 Query 412 TTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCA 471 ||||||||| | |||||||||||| | |||||| ||||||||||||||||||| ||||| Sbjct 3542 TTCGGATTGCACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGTGGATCA 3483 Query 472 GCATGCTACGGTGAATACGTTCCCG 496 | |||| |||||||||||||||||| Sbjct 3482 GAATGCCACGGTGAATACGTTCCCG 3458 >seq103 Length=5517 Score = 412 bits (456), Expect = 1e-112 Identities = 398/502 (79%), Gaps = 13/502 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 1195 TACGCCCGCAAGGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAGCAT 1254 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| | |||||| |||||||||| ||||| | ||| || Sbjct 1255 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAAAGTTAGTGAATGATC 1314 Query 121 TAGAGATAGAGGTTTCCCCT-TCGGGGGACAGAGTGAC-AGGTGATGCATGGTTGTCGTC 178 |||||||||| | | || ||| | || ||||| ||||||| ||||||| Sbjct 1315 TAGAGATAGATCAGTGAGCAATC-----ACAC-GAAACTAGGTGCTGCATGGCTGTCGTC 1368 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||| |||||| |||||||||||||||||||||||||||||||| || | |||||| Sbjct 1369 AGCTCGTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATGTTTAGTT 1428 Query 239 GCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTG 295 |||| || ||||| |||| ||||||| ||||||| ||| ||||| | |||||||| | Sbjct 1429 GCCAGCACGTTAAGGTGGGGACTCTAAACAGACTGCCTGTG-CAAACAGAGAGGAAGGAG 1487 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||||||||||| |||||||| |||||| | |||||||||||||||||||||||| Sbjct 1488 GGGACGACGTCAAGTCATCATGGCCCTTACGTCCGGGGCTACACACGTGCTACAATGGAT 1547 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 |||| |||||||| | || | ||||| |||| || |||| ||| ||||||| Sbjct 1548 GGTACAGAGGGCAGCAAGCTGGCAACAGCAAGCGAATCTCAAAAAGCCATTCACAGTTCG 1607 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-A 474 ||| | |||||||||||||| ||||| |||| ||||||||||||| |||||| | Sbjct 1608 GATAGAGGTCTGCAACTCGACCTCTTGAAGTTGGATTCGCTAGTAATCGCGTATCAGCAA 1667 Query 475 TGCTACGGTGAATACGTTCCCG 496 || ||||||||||||||||| Sbjct 1668 TGACGCGGTGAATACGTTCCCG 1689 >seq196 Length=562 Score = 318 bits (352), Expect = 2e-84 Identities = 256/308 (83%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 191 GAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCATCA--TTA 248 ||||||||||||||||||||| |||||||||||||||| ||||||| ||| || ||| Sbjct 1 GAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCCTTAGTTACCAGCACGTTA 60 Query 249 AGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAA 308 | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 61 TGGTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAA 120 Query 309 ATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCA 368 |||||||| |||||| | |||||||||||||||||||||||| | |||| |||| Sbjct 121 GTCATCATGGCCCTTACGGCCTGGGCTACACACGTGCTACAATGGTCGGTACAGAGGGTT 180 Query 369 GCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGC 428 || || ||||||||| ||| ||||||| ||| | || ||| ||||| | ||||||| Sbjct 181 GCCAAGCCGCGAGGTGGAGCTAATCCCAGAAAACCGATCGTAGTCCGGATCGCAGTCTGC 240 Query 429 AACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATA 488 ||||||||| ||||| ||||||||||||||||| ||||| ||| ||||||||| Sbjct 241 AACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGAATCAGAATGTCGCGGTGAATA 300 Query 489 CGTTCCCG 496 |||||||| Sbjct 301 CGTTCCCG 308 >seq5 Length=11203 Score = 181 bits (200), Expect = 3e-43 Identities = 351/512 (69%), Gaps = 31/512 (6%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| |||||| || |||||||||||||||||||| || || ||||| ||||||||| Sbjct 3027 TACGATCGCAAGATTAAAACTCAAAGGAATTGACGGAGATTTGCGCAAGCAGTGGAGCAT 2968 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 || ||||||||||| |||| |||| || |||||||| ||| ||| | | || Sbjct 2967 GTAGTTTAATTCGATACAACACGAAAAATCTTACCAATCATTG-CATTATGTATATACTT 2909 Query 121 TAG------AGATAGAG--GTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTT 172 | | | ||||| |||| | | | | ||||||| ||||||| | Sbjct 2908 TTGCTTAAAAAATAGAAAAGTTTAAGTAAATAAGCATAAA---ACAGGTGCTGCATGGCT 2852 Query 173 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGC 232 |||||||| ||| | || || |||| |||||| ||| ||||| || || ||||| Sbjct 2851 GTCGTCAGTTCGCGCTGTTAGGTGTTAGGTTAATTCCTTGAACGAACGTAATCCTTATAT 2792 Query 233 TTAGTTGCCATC---ATTAAGTTGGGCACTCTAA----GTTGACTGCCGGTGACAA--AC 283 ||| || | ||||| | | ||| | | | | | ||| || || Sbjct 2791 TTATTTAAAAGATAAATTAATATTTAATTTATAAAAAAGATAAATAGC--TGAAAATGAC 2734 Query 284 CGGA-------GGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTA 336 || ||||| |||||| || ||||| | | ||| || ||| |||||||| Sbjct 2733 ACGATTTATGTGGAAGTTGGGGATGATGTCAAGCCTTTATGGCCTTTACAGATTGGGCTA 2674 Query 337 CACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCA 396 || | |||||||||||| |||||||| || ||||||| | || | ||||||||| | Sbjct 2673 CATATGTGCTACAATGGTTAATACAAAAGGAAGCGAAAGTGTAAGCTGGAGCAAATCCTA 2614 Query 397 TAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCT 456 ||| || |||||||| |||||| |||| ||||||| ||||| |||||| ||| Sbjct 2613 AAAA-TTAATCTCAGTTTGGATTGATTTCTGAAACTCGAAATCATGAAAGTGGAATTGCT 2555 Query 457 AGTAATCGTAGATCAGCATGCTACGGTGAATA 488 ||||||||||||| || ||||| ||||||||| Sbjct 2554 AGTAATCGTAGATTAGTATGCTTCGGTGAATA 2523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503575465920