Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq8951 158 2e-36 seq112 134 2e-29 seq9916 75.2 2e-11 >seq8951 Length=1340 Score = 158 bits (174), Expect = 2e-36 Identities = 104/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 144 ATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAAC 203 |||||| |||||| |||||| ||||||||||||| |||||||||||||||||||| ||| Sbjct 1 ATTTAGTAGGTTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCACTCCACGAAC 60 Query 204 TAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| ||| ||||| |||||||||||||||||||| Sbjct 61 TAAGAACGGCCATGCACCACCATCCACCAAATCATGAAAGAGCTATCAATCTGTC 115 >seq112 Length=13817 Score = 134 bits (148), Expect = 2e-29 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||| | || | ||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 9291 CTAGTTAGTAAGTAGACGTCTCGTCCGTTATCGGAATTGACCAGACAAATCACTCCACCA 9350 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||||||| ||| ||||| |||||| || | | |||||| Sbjct 9351 ACTAAGAACGACCATGCACCACCACTTATACAATCATGAAAGATCTTTTAGTCTGTC 9407 Score = 84.2 bits (92), Expect = 3e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||| ||||||||| ||||| ||||||||||||||||||||||||||||| || Sbjct 9071 CATTGTAACGCGCGTGCAGCCCAAGGTATCTAAGGGCATCACAGACCTGTTATTGCGTCC 9130 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||||| || || | |||||| ||||||||| Sbjct 9131 AACTTCCCCCCACTTGAGGTAGGTAGTCCTTCTAAGAAG 9169 >seq9916 Length=880 Score = 75.2 bits (82), Expect = 2e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCT 64 |||||||||||||||||| |||| | ||||||||||||||||||||||| Sbjct 832 TCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCT 880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796582115787