Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq552 190 4e-46 seq140 156 8e-36 seq103 150 4e-34 >seq552 Length=650 Score = 190 bits (210), Expect = 4e-46 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||| | ||| |||||||||||||||||| ||||| ||||||||||||||| | Sbjct 263 GGACAGTGTATGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAG 322 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | ||| | | ||||| || ||||| | || | ||| ||||||||||| | | Sbjct 323 TACGAAGGTGCGCTCAGACCGGTCGGAAATCGGTCGTAGAGTATAAAGGCAAAAGCGCGC 382 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 |||||||||| || || ||| |||||| |||||||| || |||| |||||||| ||| Sbjct 383 TTGACTGCGAGACAGACACGTCGAGCAGGTACGAAAGTAGGTCTTAGTGATCCGGTGGTT 442 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 443 CTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACGCCGGGGATA 490 >seq140 Length=166553 Score = 156 bits (172), Expect = 8e-36 Identities = 180/241 (75%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 77 TGGATTTCTAACCGGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGA 136 ||||| |||||||| ||| || ||| ||||||||||| | ||| ||||||| Sbjct 240 TGGATGTCTAACCGCGGTCCGT-TATCCGGATCCGGGACAGTGTATGGTGGGTAGTTTGA 182 Query 137 CTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATG 196 ||||||||||||||||| |||||||||||||||||| | | | | ||||| || | Sbjct 181 CTGGGGCGGTCGCCTCCTAAAGAGTAACGGAGGCGCGCGATGGTGGGCTCAGACCGGTCG 122 Query 197 GAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAG 256 |||| | || ||||||| |||| ||| | ||||||||| || |||||| || Sbjct 121 GAAATCGGTCGTCGAGTGCAATGGCATAAGCCCGCCTGACTGCGAGACTGACAAGTCGAG 62 Query 257 CAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGAC 316 ||| |||||||||||| | || |||||||| ||| | | ||||| |||| |||||| || Sbjct 61 CAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTCCCGCGTGGAAGGGCCATCGCTCAAC 2 Query 317 G 317 | Sbjct 1 G 1 >seq103 Length=5517 Score = 150 bits (166), Expect = 4e-34 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||| ||| | ||| ||||||||||||| |||||||||| ||| ||||||||||| Sbjct 4608 GGACATTGTTTGATGGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAAGGTAACGGAGGCT 4667 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 ||||| || |||| | ||| |||| | | ||||||| ||| ||| || Sbjct 4668 TTCAAAGGTAAGCTCAATACGCTTGGTAACCGTATGAGGAGTGCAATAGCATAAGCTTGC 4727 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 ||||||| || | |||| | ||||||| |||||| ||| || |||||||| ||| Sbjct 4728 TTGACTGTGAGGCAGACAAGCCGAGCAGGGTCGAAAGACGGATATAGTGATCCGGTGGTT 4787 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| |||| |||||| | ||||||||| ||| ||||||||| Sbjct 4788 CTGCATGGAAGGGCCATCGCTCAAAGGATAAAAGGTACGCTGGGGATA 4835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982122697952