Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001187.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq9735 295 1e-77 seq4038 100 4e-19 >seq9735 Length=3881 Score = 295 bits (326), Expect = 1e-77 Identities = 209/238 (88%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 3 AGGCGCAAGCGGTACAGGCGACGCTTGAGCTTTGCCCAGGTACTGCATGCGCGCGACGAT 62 |||| || ||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 2030 AGGCTCAGGCGATACAGGCGACGCTTGAG-TTTGCCCAAATACTGCATGCGCGCGACGAT 1972 Query 63 TTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTGCAGGTTGAG 122 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1971 TTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCTTGCAGGTTGAG 1912 Query 123 CATTTGCGGGATGAACAGCTCGCGGGTTTGCGCCATGACCTGGCCGATGCCGGCGCGGGT 182 ||| |||||||||||||| |||||||| || | ||||||||||||||| ||||| ||| | Sbjct 1911 CATCTGCGGGATGAACAGTTCGCGGGTCTGGGGCATGACCTGGCCGATACCGGCACGGAT 1852 Query 183 CTGGCCCAGCAGCCATTCGTTCAGACCTGCTTCTTTAAGCTGTGCAGTCAATTGGCTG 240 ||||||||||||||||| |||||| | |||| | | ||||| | | ||||||| Sbjct 1851 CTGGCCCAGCAGCCATTGGTTCAGTTCACCTTCGTGCAATTGTGCGGCGAGTTGGCTG 1794 >seq4038 Length=12069 Score = 100 bits (110), Expect = 4e-19 Identities = 84/102 (82%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 54 CGCGACGATTTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTG 113 |||||| |||||||||||||||||||||||||| |||||||||| |||||| | ||||| Sbjct 9089 CGCGACCATTTCCTGGCCGGTGTAGCAGCCTTTTTTGAAGCTGATGCCGCCCAGCGCCTG 9148 Query 114 CAGGTTGAGCATTTGCGGGATGAACAGCTCGCGGGTTTGCGC 155 ||||||| ||||| |||||| || ||| ||| |||| Sbjct 9149 CAGGTTGGTGGCCTGCGGAATGAACTGCCCGC-TGTTAGCGC 9189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735798741490