Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001228.1 Length=576 Score E Sequences producing significant alignments: (Bits) Value seq9037 361 2e-97 seq3249 105 2e-20 >seq9037 Length=649 Score = 361 bits (400), Expect = 2e-97 Identities = 363/472 (77%), Gaps = 22/472 (5%) Strand=Plus/Minus Query 3 ACCCCGAGGTCACGGCGGCCGACCTGAAGCTGGCCCTGGCCGAGATGGAGCAGTTCTACG 62 |||||| | ||| || | ||||| |||| |||||| |||||| ||||||||| | Sbjct 470 ACCCCGGGATCAGCGCCGAGGACCTCAAGCAGGCCCTCGCCGAGCGCGAGCAGTTCCTGG 411 Query 63 ACGTGCAACCGTCTGAGCTTGAGCAGCTCGATCCACGCG-GCGCAGGGCCATGCACGGCG 121 |||| ||| ||||| || |||| |||||| || ||| || | |||| ||||| Sbjct 410 ACGTTACCCCGCAGGAGCTGGAAGAGCT-GATCCAGGCCAGCG-AGCGGTATGCCCGGCG 353 Query 122 GCGCAGCATCGGCGAGGTGCTCAGTCGCCGTG-------------------CATAAATGC 162 ||||| |||||||| ||| || |||| | || |||||| Sbjct 352 GCGCACCATCGGCGCGGTTTTCCAGCGCCAGGGCCAGCCTCCTCCATAAGGCAAAAATGC 293 Query 163 AATAACGACCTGCAGGATTCCCCGGTGTACTGGGCAAATGTGCACTGGTAGGATCGCAAG 222 || ||||||||||| |||||| |||||||||||||| |||||||||| |||||| || Sbjct 292 AAAAACGACCTGCATGATTCCGACTTGTACTGGGCAAATTTGCACTGGTACGATCGCGAG 233 Query 223 AAGGTTCGTCCCCGAACATCTTGATAAAGAACAATAAAAGCAGGGAGTTAGCGATGACTG 282 | |||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 232 ATGGTTCGCCCGCGAACATCTTGATAAAGAACAATAAAAGCAGGGAGTTAGAGATGACTG 173 Query 283 CTCAGGTTTCATCCGAGGCAAGCCACACCGACCATCTTCAAGCCGACATACTCGCCGAAG 342 ||||||||||||||||||||||| | ||| | | |||| ||| | || || | | Sbjct 172 CTCAGGTTTCATCCGAGGCAAGCAGCGCCGGGATTGTGCAAGACGAGGTCCTGGCGCACG 113 Query 343 TCCGCAACCATATCGGCCACCTCACCCTCAACCGCCCCGCCGGCCTGAACGCCATTACCC 402 | ||||||||||| |||||||| |||||||| |||||||| ||||| |||||| | |||| Sbjct 112 TACGCAACCATATTGGCCACCTGACCCTCAATCGCCCCGCAGGCCTTAACGCCCTCACCC 53 Query 403 TGGACATGGTCCGCAGCCTGAGCCACCACCTGCAGGCCTGGGCCGACGATCC 454 ||||||||||||||||||| |||| || ||||||| ||||| |||||||| Sbjct 52 TGGACATGGTCCGCAGCCTCAGCCGGCATTTGCAGGCGTGGGCGGACGATCC 1 >seq3249 Length=3457 Score = 105 bits (116), Expect = 2e-20 Identities = 78/91 (86%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 486 GGGGAAAAAGCCTTCTGCGCGGGCGGCGATATCCGTTCCTTGCATGACAGTTTCAAGAGC 545 || || |||||||||||||| |||||||| || || || || | ||||| ||||||||| Sbjct 1422 GGTGAGAAAGCCTTCTGCGCCGGCGGCGACATTCGCTCGCTGTACGACAGCTTCAAGAGC 1481 Query 546 GGCGACACCCTGCACGAAGACTTCTTTGTCG 576 ||||||||||| |||||||||||||| |||| Sbjct 1482 GGCGACACCCTCCACGAAGACTTCTTCGTCG 1512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1740308624384