Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001232.1 Length=307 Score E Sequences producing significant alignments: (Bits) Value seq3981 282 7e-74 seq13442 78.8 2e-12 >seq3981 Length=3404 Score = 282 bits (312), Expect = 7e-74 Identities = 246/306 (80%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 2 GAAATCGACGATAAAGAAGTCACACTCGCCCACGGCCCCTTCAAGACACTGGGCATGCAG 61 || ||| |||| ||||||||||| ||||||||||| |||||||||||| |||| |||| Sbjct 2216 GAGATCAACGACAAAGAAGTCACGCTCGCCCACGGTCCCTTCAAGACATTGGGTATGCCA 2157 Query 62 GGCATGACGATGACGTTTCCACTTGCCAATCCTACCCTGATTCAGGGTCTGAAAACGGGC 121 |||||||||||||| || || || |||| |||| | ||||| |||| || ||||||||| Sbjct 2156 GGCATGACGATGACTTTCCCTCTCGCCACTCCTGCTCTGATGAAGGGCCTAAAAACGGGC 2097 Query 122 GACAAGGTTCGGGTCGCGGTGAGCCAAACCGACGATGGATTGCGTGTCGAACGTCTAGAT 181 |||||||||||| |||| || ||||| || |||||||| ||||||| |||||||| || Sbjct 2096 GACAAGGTTCGGATCGCTGTTAGCCAGACGGACGATGGTCTGCGTGTTGAACGTCTGGAA 2037 Query 182 AAAACGGGAGGTCAGCCATGATCGCTGCCCTCATCCGTTGGTCTGTTGCCAACCGCTTTT 241 | || || |||||||||| || ||||| || || ||||| || |||||||||||| Sbjct 2036 CGCTCTGGGGGCCAGCCATGATTGCGGCCCTTATTCGCTGGTCGGTGGCCAACCGCTTTC 1977 Query 242 TGGTGCTGTTGGCGACACTTTTCGTCACAGCTTGGGGCATCTGGTCAGTTCAGAACACAC 301 | ||| || ||||||| || |||||||| || ||||| |||||| | ||||| | || | Sbjct 1976 TTGTGTTGCTGGCGACGCTGTTCGTCACGGCATGGGGGATCTGGGCGGTTCAAAGTACGC 1917 Query 302 CAATCG 307 | |||| Sbjct 1916 CCATCG 1911 >seq13442 Length=664 Score = 78.8 bits (86), Expect = 2e-12 Identities = 67/83 (81%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 220 TGGTCTGTTGCCAACCGCTTTTTGGTGCTGTTGGCGACACTTTTCGTCACAGCTTGGGGC 279 ||||| || |||||||||||||||||| |||||||||| | ||||| || || ||||| Sbjct 664 TGGTCGGTGGCCAACCGCTTTTTGGTGTTGTTGGCGACTTTATTCGTGACGGCCTGGGGT 605 Query 280 ATCTGGTCAGTTCAGAACACACC 302 | ||||| | |||||||| || Sbjct 604 TTGTGGTCGATCCAGAACACCCC 582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 879751602400