Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001354.1 Length=381 Score E Sequences producing significant alignments: (Bits) Value seq2827 297 4e-78 seq2840 82.4 2e-13 >seq2827 Length=2589 Score = 297 bits (328), Expect = 4e-78 Identities = 292/377 (77%), Gaps = 0/377 (0%) Strand=Plus/Plus Query 3 AGCAGTTCCACCGCGCGCAGATCGCCCGCCGAATCGTGGCCGGTGGGAATCAGGTTGGCG 62 ||||| |||||||| ||||| ||||||||||| || |||||| ||| |||||||| ||| Sbjct 408 AGCAGCTCCACCGCCCGCAGGTCGCCCGCCGAGTCATGGCCGCTGGCAATCAGGTCGGCT 467 Query 63 TCCAGCAGGGCGTCGGCAAAGGCGGGGTTGATGCCGTATCGGCAACGGTAACCCTCGTGG 122 ||||||| ||| | ||| | || |||||||| || ||||||||||| || || ||| Sbjct 468 TCCAGCAATGCGCTTTCGAAGTCTGGATTGATGCCATAGCGGCAACGGTAGCCTTCATGG 527 Query 123 ATGTCCAGGCTGCCGTAGGCCTGGGCAATGCGCGTGTACGCGGCCAGGCGCACGGTGTCG 182 || || ||| || ||||||||| ||| ||||| || | || || ||| | ||||||| Sbjct 528 ATATCGAGGGTGGCGTAGGCCTCGGCGATGCGGGTAAAGGCCATCAAGCGAATGGTGTCG 587 Query 183 TTCACTTCCACCAGGGAGCAGTCCAGCGGCGTGATGACGGCGCGCTCAGCATCGGGCATT 242 || |||||||||| | |||| || ||| || | || || ||| | ||||| Sbjct 588 GTCGCTTCCACCAGCGCGCAGGTCAACGGTGTCAGCACTGCACGCGGCGAGTCGGGGGCC 647 Query 243 AATTCGCCGTGCTGGGCATCGGCCCAGCCGAGCACATGACGGGCATATTCCAGCACGGCA 302 | |||||| |||| ||| ||||||||||| ||||| | ||||||||||||||||| || Sbjct 648 AGTTCGCCATGCTCGGCGTCGGCCCAGCCCAGCACGTTGCGGGCATATTCCAGCACCGCG 707 Query 303 TGTTGAAAACCGCCGCAGGTACCGAGGAAAGGGCGACCTTGTTCGCGGGCAAAACGTATC 362 |||||||||||||||||||| |||||||| ||||| |||||| |||||| | || || Sbjct 708 TGTTGAAAACCGCCGCAGGTGCCGAGGAACGGGCGCTTTTGTTCACGGGCATACCGGATG 767 Query 363 GCGCGCAGGGCGCCGTC 379 || |||| |||||||| Sbjct 768 GCCAGCAGCGCGCCGTC 784 >seq2840 Length=6732 Score = 82.4 bits (90), Expect = 2e-13 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 266 CCAGCCGAGCACATGACGGGCATATTCCAGCACGGCATGTTGAAAACCGCCGCAGGTACC 325 |||||||||||| | ||||| ||||| | ||| || || ||||| ||||||||||| || Sbjct 6378 CCAGCCGAGCACGTTGCGGGCGTATTCAATCACCGCGTGCTGAAAGCCGCCGCAGGTGCC 6319 Query 326 GAGGAAAGGGCGACCTTGTTCGCGGGCAAAACGTATCGCG 365 ||||||||| | | ||| |||||| | || |||||| Sbjct 6318 GAGGAAAGGAATGCTGTTTTCCCGGGCATAGCGGATCGCG 6279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1116484760864