Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001383.1 Length=561 Score E Sequences producing significant alignments: (Bits) Value seq14136 298 2e-78 >seq14136 Length=1088 Score = 298 bits (330), Expect = 2e-78 Identities = 223/260 (86%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 296 AGGTTGAATGCGAGCAAGGCCAGCATGTACTTCTGCCAGCTTTGTTCCTGCTGTGCGTCC 355 |||||||| || ||||| |||||| ||| ||||||||||| |||||||| | || || Sbjct 829 AGGTTGAACGCCAGCAACGCCAGCGCGTATTTCTGCCAGCTCTGTTCCTGGTCCGCATCG 888 Query 356 ACACCCGACAGGCGATAACAGGCGCTTTCCACCGGCCCCAGCACCGGGCTGAGCCAGGTG 415 |||||||| |||||||| || ||| || ||||| || | |||||| |||||||||| Sbjct 889 ACACCCGAAAGGCGATAGCACACGCGCTCGACCGGGCCGAACACCGGCGTGAGCCAGGTT 948 Query 416 CGCTGGCCCTCCATCACCTTGTAGTAGAACCGCCCCAGGAACGGAGTCGGCACCAGTACC 475 ||||| || ||||| |||||||||||||||||||||||| ||| | ||| | ||| ||| Sbjct 949 CGCTGCCCTTCCATTACCTTGTAGTAGAACCGCCCCAGGGCCGGTGCCGGAATCAGCACC 1008 Query 476 ACGGCAAAGAAGGCGATGATCAGCCAATAGTCATAACTGTGCATAGCC-GCTCCTAGTTC 534 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1009 AAGGCAAAGAAGGCGATGATCAGCCAATAGTCATAACTGTGCATAGCCTGCTCCTAGTTC 1068 Query 535 CGATCCGCGCGTAACAGCGC 554 |||||||||||||||||||| Sbjct 1069 CGATCCGCGCGTAACAGCGC 1088 Score = 105 bits (116), Expect = 2e-20 Identities = 129/175 (74%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 1 TCGACCCTGATTTTAAACACGGTCTGGGCATATTTGCGCCCAATCCCACTTTATAGTGCT 60 ||||||| || || || |||| || ||||||| || ||||||| | | || Sbjct 475 TCGACCCAGAAGTTGCCCAAAGTCTTGGTGGATTTGCGACCGATCCCACGGCACAACGCG 534 Query 61 TACCATCACGGACAGGACTGTCGCGTTGTTGACGAAGTTCTGCTCCGTGAGGACGGCCAT 120 |||| |||| ||| | || ||| |||||||||||||| | |||||| || |||| Sbjct 535 -ACCAGTACGGCGAGGCCGGTGGCGGCACTGACGAAGTTCTGCACGGTGAGGCCGACCAT 593 Query 121 CTGACTTAGATAATTTAAGGACGCCTCACCGCTGTTGTTCTGCCAGTTGGTATTG 175 |||||| || || | | |||||| |||||||||| ||||||||||||||| ||| Sbjct 594 CTGACTGAGGTAGCTCAGGGACGCTTCACCGCTGTAGTTCTGCCAGTTGGTGTTG 648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1692322173344