Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001436.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq22538 280 2e-73 seq457 136 4e-30 >seq22538 Length=728 Score = 280 bits (310), Expect = 2e-73 Identities = 181/198 (91%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 1 CGACCTTTTTGCTCGCCTTCAAGCGCCGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 60 |||| || ||||| ||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 433 CGACTTTCTTGCTGGCCTTCAGGCGACGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 492 Query 61 CCAGGCCCAGTTCCGGATGCTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAG 120 ||||||||| ||| || || ||||||||||||||||||||||| ||||||||||| || | Sbjct 493 CCAGGCCCAATTCAGGGTGTTCGTTGAGCCACAGGCTGAAGGCATCCTTGACCACCCCGG 552 Query 121 AGACAAACGCCGCTGCCTCGCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCG 180 |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 553 AGACGAACGCCGCTGCCTCACGGGACGACAGGCGCTCCTTGGTCTGGCCGGAGAATTGCG 612 Query 181 GTTCCTGCATCTTCATCG 198 | |||||||| ||||||| Sbjct 613 GCTCCTGCATTTTCATCG 630 >seq457 Length=25928 Score = 136 bits (150), Expect = 4e-30 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 84 TTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAGAGACAAACGCCGCTGCCTCGCGG 143 || ||||||||||||||||||||||| |||||||| ||||| |||||||| || ||| Sbjct 14849 TTCAGCCACAGGCTGAAGGCGTCCTTCACCACGCCGGAGACGAACGCCGCGCACTGGCGC 14790 Query 144 GACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCGGTTCCTGCATCTTCATCG 198 |||||||| ||||| ||||| ||||||| ||| ||||| ||||||||||||| || Sbjct 14789 GACGACAGACGCTCTTTGGTTTGCCCGGCGAACTGCGGATCCTGCATCTTCACCG 14735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534253868821