Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001590.1 Length=402 Score E Sequences producing significant alignments: (Bits) Value seq2140 271 2e-70 seq702 228 2e-57 >seq2140 Length=1669 Score = 271 bits (300), Expect = 2e-70 Identities = 274/355 (77%), Gaps = 6/355 (2%) Strand=Plus/Plus Query 1 CGAGGACATCTACAGCCGAAAGGCCGTGGGCTGGGAAGTTTACGAGCAAGAAAGTGGCGA 60 |||||| || |||||||| ||||||||||||||||| || ||||| ||||| || || Sbjct 1067 CGAGGATATTTACAGCCGCAAGGCCGTGGGCTGGGAGGTCTACGACGCGGAAAGCGGTGA 1126 Query 61 GCTGGCGGCCGAACTGATGCAGCGCACCGTGCTCACCGAACGCTGCGC---CGGACGGCC 117 || |||| ||| |||| |||| |||| || || | || || || || Sbjct 1127 AAAAGCCGCCGCGCTGCTGCAACGCAGCGTGATCGGTGAGCAGTGTTTACACGAACCGC- 1185 Query 118 CTTAGTGCTGCACTCGGACAACGGTGCACCGATGAAATCGGTGACGTTGCTGAGCAAACT 177 | |||||||||||||||||||| || |||||||||||||||||| |||||||||| | Sbjct 1186 --TGGTGCTGCACTCGGACAACGGAGCGCCGATGAAATCGGTGACGCTGCTGAGCAAGAT 1243 Query 178 GTACGAACTCGGCATCACCCCGTCACGCGGACGACCACGGGTGAGTAACGATAATCCCTA 237 |||||| || |||||||| || || || || ||||| || ||||| ||||| |||||||| Sbjct 1244 GTACGACCTGGGCATCACGCCTTCGCGGGGCCGACCGCGTGTGAGCAACGACAATCCCTA 1303 Query 238 CTCAGAATCGCTGTTTAGAACCCTGAAATATTGCCCGCAATGGCCTCCTGGTGGTTTTGC 297 ||| || |||||||||||||| |||||||| |||||||||||||| | | ||||||||| Sbjct 1304 CTCGGAGTCGCTGTTTAGAACGCTGAAATACTGCCCGCAATGGCCGCTGGATGGTTTTGC 1363 Query 298 AGATTTGGACGCGGCACGCAGCTGGGTGCGCGATTTTATCCGCTGGTACAACCAC 352 | |||| || || || |||||| | ||||||| || ||||||||| || Sbjct 1364 CAGTCTGGATGCTGCTCGGGCTTGGGTGAGGAATTTTATGCGGTGGTACAACAAC 1418 >seq702 Length=1600 Score = 228 bits (252), Expect = 2e-57 Identities = 262/350 (75%), Gaps = 2/350 (1%) Strand=Plus/Plus Query 1 CGAGGACATCTACAGCCGAAAGGCCGTGGGCTGGGAAGTTTACGAGCAAGAAAGTGGCGA 60 ||| || ||||||||||||||||| |||||||||||||||||||| ||||||||| || Sbjct 1060 CGAAGATATCTACAGCCGAAAGGCGGTGGGCTGGGAAGTTTACGACGTAGAAAGTGGTGA 1119 Query 61 GCTGGCGGCCGAACTGATGCAGCGCACCGTGCTCACCGAACGCTGCGCCGGACGGCCCTT 120 || || | | | |||| || | |||| | |||| ||| | | ||| | Sbjct 1120 AAAAGCAGCAGTATTACTGCAACGAAGCGTGACCCAGGAACAGTGCTGGCGCCAGCCGCT 1179 Query 121 AGTGCTGCACTCGGACAACGGTGCACCGATGAAATCGGTGACGTTGCTGAGCAAACTGTA 180 ||||||||||| |||||||| || |||||||| ||||||||| |||||| ||| |||| Sbjct 1180 GGTGCTGCACTCTGACAACGGCGCGCCGATGAAGTCGGTGACGCTGCTGACCAAGATGTA 1239 Query 181 CGAACTCGGCATCACCCCGTCACGCGGACGACCACGGGTGAGTAACGATAATCCCTACTC 240 ||| || |||||||| || || || || ||||| ||||| || || || || || || || Sbjct 1240 CGATCTGGGCATCACGCCATCTCGTGGTCGACCGCGGGTCAGCAATGACAACCCGTATTC 1299 Query 241 AGAATCGCTGTTTAGAACCCTGAAATATTGCCCGCAATGGCCTCCTGGTGGTTTT-GCAG 299 ||||| ||||| || || |||||||| |||||||| ||||| | | ||||||| |||| Sbjct 1300 GGAATCACTGTTCAGGACGCTGAAATACTGCCCGCAGTGGCCACTAGATGGTTTTAGCAG 1359 Query 300 ATTTGGACGCGGCACGCAGCTGGGTGCGCGATTTTATCCGCTGGTACAAC 349 |||| | || || |||||| | || ||||| |||||||||| Sbjct 1360 -CCTGGATGATGCGCGTGTTTGGGTGAGGGACTTTATGACCTGGTACAAC 1408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1183665792320