Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq2093 279 1e-72 seq24421 100 6e-19 seq6414 95.1 2e-17 seq10865 75.2 2e-11 >seq2093 Length=8280 Score = 279 bits (308), Expect = 1e-72 Identities = 186/207 (90%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 64 GCGAACAGCCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACAC 123 |||| ||||||||||| |||||||||||| |||||||||||||||| |||||||| || | Sbjct 8280 GCGAGCAGCCGCCGATTCTGGCGGTGCGCTTGCAGGAATTGTTCGGGCTGGCGGATACGC 8221 Query 124 CGCGCATTGCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGGC 183 |||| |||||||||||||| |||||||||||| |||||||| |||| ||| | | ||| Sbjct 8220 CGCGGATTGCCGGCGGGCGGCAGGTGGTCAAGCTGCACCTGTTGTCACCGGCCAGACGGC 8161 Query 184 CGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAGA 243 | ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 8160 CCGTGCAGGTGACGCAGGACCTGGCGAACTTCTGGCGCAGTACTTACGCCGAGGTGAAGA 8101 Query 244 AGGATCTGAAGGGGCGGTATCCGAAGC 270 ||||| ||||||||||||||||||||| Sbjct 8100 AGGATTTGAAGGGGCGGTATCCGAAGC 8074 >seq24421 Length=266 Score = 100 bits (110), Expect = 6e-19 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 3 GACGAACTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGCTCGTCGGTGCGCCTGGACTAC 62 ||||| ||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||| Sbjct 197 GACGAGCTGGCGCCGCACCATCTGAAGGTGCCGTCGGGCTCGTCGGTGCGGCTGGACTAC 256 Query 63 AGCGAACAGC 72 ||||| |||| Sbjct 257 AGCGAGCAGC 266 >seq6414 Length=4344 Score = 95.1 bits (104), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 81 CTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACACCGCGCATTGCCG----G 136 ||||||||||| ||||||| |||||||| ||| || ||| || |||| | Sbjct 1078 CTGGCGGTGCGTATGCAGGAGATGTTCGGCGAGGCCACGACGCCGGTGATCGCCGAGGGG 1137 Query 137 CGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGGCCGGTGCAGGTGAC 196 |||| ||| | |||| | || | |||||||| || | | | ||| ||||| | || Sbjct 1138 CGGGTGCC-GCTGGT---GCTGGAGCTGCTGTCGCCTGCCCAGCGTCCGCTGCAGATCAC 1193 Query 197 CCAGGATCTG-GCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAGAAGGATCTGAAGG 255 || |||||| ||| |||||||| | | |||| ||||||| |||| || |||||| Sbjct 1194 CCGCGATCTGAGCGC-CTTCTGGCAAGGGAGCTACCGCGAGGTGCAGAAAGAGATGAAGG 1252 Query 256 GGCGGTATCCGAAGCATTATTGGCCGGATGATCCG 290 | || ||||||||||| |||||||| |||||| Sbjct 1253 GACGCTATCCGAAGCACGTCTGGCCGGACGATCCG 1287 >seq10865 Length=624 Score = 75.2 bits (82), Expect = 2e-11 Identities = 70/89 (79%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 267 AAGCATTATTGGCCGGATGATCCGTTGGTGGCCGAAGCGACGGCGCGGATCAAACCCCGT 326 |||||||| |||||||||||||||||| | || ||| |||| || |||||||| || | Sbjct 143 AAGCATTACTGGCCGGATGATCCGTTGATTGCTGAACCGACTGCCCGGATCAAGCCGAGA 202 Query 327 AAGTAGCAACGACGGAGATCAACTGTGGG 355 ||||| || || ||||| | |||||| Sbjct 203 AAGTAAGTACATCGCAGATCTAATGTGGG 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033308245728