Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq3138 731 0.0 seq1188 237 4e-60 seq25415 147 6e-33 seq19428 75.2 3e-11 >seq3138 Length=4308 Score = 731 bits (810), Expect = 0.0 Identities = 434/453 (96%), Gaps = 0/453 (0%) Strand=Plus/Minus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 2966 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGACTCACGGATGGCACGACGTTCC 2907 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2906 ACCTGGGTGGATTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 2847 Query 123 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCG 182 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 2846 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTTTCGCAGACACTGAAGTCAGCA 2787 Query 183 ATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATG 242 |||||||| || ||||||||||||||||||||||| ||||| ||||| ||||| | |||| Sbjct 2786 ATCACGCCATCCTTCATCGGACGAATGGCAGCAATGTTGCCCGGTGTTCGGCCCAACATG 2727 Query 243 CGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCC 302 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2726 CGCTTGGCCTCGGTGCCAACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCC 2667 Query 303 ACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCA 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2666 ACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCA 2607 Query 363 GTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGG 422 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2606 GTGCCCAGGTCGATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGA 2547 Query 423 AAAGGACCCTAAGCAACGCGTGGGTAAAAAAGT 455 || |||||||| ||||||||||||||||||||| Sbjct 2546 AAGGGACCCTAGGCAACGCGTGGGTAAAAAAGT 2514 >seq1188 Length=19351 Score = 237 bits (262), Expect = 4e-60 Identities = 292/398 (73%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||||||||| ||||||||||| || ||||| | || |||||||| || || ||||| | Sbjct 18954 CGATCAGGAAGACTTCACGGGCGCCTGCGCCCTGCGCGGATTCACGAATAGCGCGACGTT 19013 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 | |||||||| | ||| || || | |||||| || ||||| || ||| || | Sbjct 19014 CGACCTGGGTTGCGCCAACCGGTACACACACCAGCACGCGCGGGCTCGGGCGCATAAAGC 19073 Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180 |||| ||| || | ||||| |||| |||||||||||| || ||| |||||| | Sbjct 19074 TGTTGCTGTGCACTTGTTTGATAAAGTGCTGCAGCATCTTTTCCGTCACGAAGAAGTCAG 19133 Query 181 CGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCA 240 |||| |||||||| |||||||| ||||| || || ||||| || || ||||||||||||| Sbjct 19134 CGATAACGCCGTCCTTCATCGGGCGAATCGCCGCGATATTACCCGGGGTACGGCCGAGCA 19193 Query 241 TGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTC--TGAT----TACCATGGGTCC 294 | |||| || || || ||||| |||| |||||| ||| || || | Sbjct 19194 TCTGCTTCGCTTCATGACCCACGGCGGCGACGCTTTTCGGCGATCCGGCACGATCCTGAC 19253 Query 295 GAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGG 354 |||||||||| || || |||||||||| ||||| || | | ||||||||||||| Sbjct 19254 GAATGGCCACCACGGAAGGCTCATTCAATACGATGCCTTGTCCTTTTACGTAAATAAGGG 19313 Query 355 TGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAA 392 | || || || |||||||||||||| || || ||||| Sbjct 19314 TATTCGCGGTACCCAGGTCAATGGACAGGTCATTGGAA 19351 >seq25415 Length=245 Score = 147 bits (162), Expect = 6e-33 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||||||||| ||||||||||| || ||||| | || |||||||| || || ||||| | Sbjct 229 CGATCAGGAAGACTTCACGGGCGCCTGCGCCCTGCGCGGATTCACGAATAGCGCGACGTT 170 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 | |||||||| | ||| || || | |||||| || ||||| || ||||||| | Sbjct 169 CGACCTGGGTTGCGCCAACCGGTACACACACCAGCACGCGCGGGCTCGGGCGCAGGAAGC 110 Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180 | ||| ||||| |||||||||| || |||||| |||| | | ||||||||| Sbjct 109 GCGACTTGTGGACCTTCTTGATGAAGTGCTTGAGCATCGCCTCGGTGTAGGTGAAGTCGG 50 Query 181 CGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGT 229 |||| |||||||| |||||||| || |||| | |||| ||| || || Sbjct 49 CGATGACGCCGTCCTTCATCGGGCGGATGGTGGTGATATGGCCCGGGGT 1 >seq19428 Length=737 Score = 75.2 bits (82), Expect = 3e-11 Identities = 82/109 (75%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||||||||| ||||||||||| || ||||| | || |||||||| || || ||||| | Sbjct 114 CGATCAGGAAGACTTCACGGGCGCCTGCGCCCTGCGCGGATTCACGAATAGCGCGACGTT 55 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGG 109 | |||||||| | ||| || || | |||||| || ||||| || Sbjct 54 CGACCTGGGTTGCGCCAACCGGTACACACACCAGCACGCGCGGGCTCGG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353217919328