Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001693.1 Length=610 Score E Sequences producing significant alignments: (Bits) Value seq4417 230 9e-58 seq6117 96.9 1e-17 >seq4417 Length=982 Score = 230 bits (254), Expect = 9e-58 Identities = 357/514 (69%), Gaps = 3/514 (1%) Strand=Plus/Plus Query 12 CACCC-ACCCCGGTGTGGTGCGGCGACCTCCCCTACATCTGGGCCCATGGGAAATGGCAT 70 ||||| | || ||| ||||||||||| || ||||||||||||| || || |||||| Sbjct 409 CACCCGAACCGGGTTTGGTGCGGCGATATCACCTACATCTGGGCGCAAGGTCGCTGGCAT 468 Query 71 TACCTGGCTGTCGCGCTGGATCTTTGCTCGCGCCGGGTGGTGGCTTGGGCGTTGACCAGA 130 |||||||| || | ||||||||| | | | || ||| | | | |||||| | ||| | Sbjct 469 TACCTGGCCGTGGTGCTGGATCTGTACACCCGGCGGACGATTGGCTGGGCGCTTTCCACA 528 Query 131 CACCCCGGACGCCGATCTGGCTATGCGGGCGCTGGATATGGCTTACCAGCCTGCACGACG 190 | || ||| |||| |||| || ||| || | Sbjct 529 AAGCC-GGATGCCGCGCTGGTGATCAAGGCCCTCGNNNNNNNNNNNNNNNNNNNNNNNNA 587 Query 191 A-CCTCATGGTCTGCTGGTTCACTCGGATCAAGGGTCGCAGTATGCGAGTCGTTTATTTC 249 | || || ||| | |||| || ||||| || ||||| | || || | || | Sbjct 588 AGCCACAGCAGGTGCGGTTTCATTCCGATCAGGGCAGCCAGTACACCAGCCGCCTGTTCC 647 Query 250 GCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATGAGTCGCCGGGGAAATTGCTGGG 309 | |||||||| |||||||| || || |||||||||||||||||||| || ||||||| Sbjct 648 GGCAGCGGCTATGGCGTTACCGGATCGAACAGAGCATGAGTCGCCGGGGGAACTGCTGGG 707 Query 310 ACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAAACGGAGTGGATACCGACCACGG 369 | || |||| ||||||||| |||| |||||| ||||| | |||||||| || | || | Sbjct 708 ATAACTCGCCGATGGAGCGCCTGTTTCGCAGCCTGAAATCAGAGTGGATTCCAGCGACTG 767 Query 370 GTTACCGAACGGCTCAAGAAGCCCAGCGCGATATCAGCCAATTCTTAATGCATCGGTACA 429 |||||| ||||| ||||||||||| || |||||||| | | | ||||| || |||| Sbjct 768 GTTACCTGACGGCCATGGAAGCCCAGCGGGACATCAGCCATTACCTGATGCACCGCTACA 827 Query 430 ACTGGATTCGCCCCCATCGATTCAACGGTGGGCTGGCGCCAGCTCGGGCCGAAGAAAAAC 489 | ||||| | || |||| ||| || ||||| ||||||| ||| |||||||||| Sbjct 828 AGTGGATCAGGCCACATCAGCACAATGGCGGGCTACCGCCAGCGGTGGCTGAAGAAAAAC 887 Query 490 TTAACGTCGTGTCCGGGATTAGTTGACCACTACA 523 |||| |||||||| ||||||||||||| Sbjct 888 TTAAACCACAATCCGGGATGGGTTGACCACTACA 921 >seq6117 Length=4940 Score = 96.9 bits (106), Expect = 1e-17 Identities = 138/188 (73%), Gaps = 5/188 (3%) Strand=Plus/Plus Query 46 CATCTGGGCCCATGGGAAATGGCATTACCTGGCTGTCGCGCTGGATCTTTGCTCGCGCCG 105 |||||||||| | ||||||||||||||||| ||||||| |||||||| | | | ||| | Sbjct 2646 CATCTGGGCCGA-GGGAAATGGCATTACCTAGCTGTCGTTCTGGATCTCTACGCACGCTG 2704 Query 106 GGTGGTGGCTTGGGCGTTGACCAGACACCCCGGACGCCGATCTGGCTATGCGGGCGCTGG 165 | |||| | |||| || |||||| ||||| || ||||| | || |||| ||| Sbjct 2705 AATTGTGGGTAGGGCACTG-TCAGACA-GCCGGATGCGGATCTAGTCATCAAGGCGTTGG 2762 Query 166 ATATGGCTTACCAGC-CTGCACGACGACCTCATGGTCTGCTGGTTCACTCGGATCAAGGG 224 | ||||||||| ||| | | | | ||| | || |||||| || |||| |||| || Sbjct 2763 ACATGGCTTACGAGCAACGTTCTA-GGCCTTAAGGGCTGCTGTTTGACTCAAATCAGGGC 2821 Query 225 TCGCAGTA 232 ||||| || Sbjct 2822 TCGCAATA 2829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1845862529693