Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001757.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq19078 448 1e-123 seq25560 181 3e-43 >seq19078 Length=682 Score = 448 bits (496), Expect = 1e-123 Identities = 344/415 (83%), Gaps = 0/415 (0%) Strand=Plus/Plus Query 1 CGACGTTCGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAAGTGCATGATCTTCT 60 ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 27 CGACGTTGGGGCTCTGGAAGCCGACGTCATAGATATGGAAGCCCAGGTGCATGATCTTCT 86 Query 61 GGTCCAGGTGCAGGTAGGGGTAGTTCCCGTCCACTGGCAGCGACGGCGCCAGCTTCACNN 120 |||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||| Sbjct 87 GGTCCAGGTGCAGGTACGGGTAGTTGCCGTCCACCGGCAGCGACGGCGCCAGTTTCACCA 146 Query 121 NNNNNNNNNNNNNNNNNNNCGCCACTTCACCGGCAGCGCGGGCCACGGCGAGGATCATGC 180 ||||||||||||||| ||||||||||||||||||||||||| Sbjct 147 CACCCACCAGCATCAGCGGCGCCACTTCACCGGCGGCGCGGGCCACGGCGAGGATCATGC 206 Query 181 CGGTCGTCATGGCCGGGCTTGCCATGGGCAAGACGATCTTCCACAGCGTCTCGGCCTTGG 240 ||||| |||| |||||||| ||||| |||| ||||||||||||||||| || ||||||| Sbjct 207 CGGTCATCATCGCCGGGCTGGCCATCGGCAGCACGATCTTCCACAGCGTTTCCGCCTTGG 266 Query 241 TCGCGCCCAAGGCCAGCGAGCCCTCGCGCACGGTACGCGGAATACGCGCCAAACCTTCTT 300 ||||||||| |||| || || || || ||||| || ||||| ||||||| ||||||| Sbjct 267 TCGCGCCCAGTGCCAAAGAACCTTCACGTACGGTGCGAGGAATCCGCGCCAGGCCTTCTT 326 Query 301 CGGTGGCCACGATCACCACCGGAACAGCCAGCAGTGCCAGGGTCAACGATGCCCACAGCA 360 | |||||||||||||||||||| || |||||||| |||||||||| |||||||| |||| Sbjct 327 CAGTGGCCACGATCACCACCGGTACCGCCAGCAGCGCCAGGGTCAGGGATGCCCAGAGCA 386 Query 361 GGTCCGGGGTACCCAAGGTCGGCGCCGGCAGTGCTTCGGGGAAGACCAAGCGGTC 415 | | || ||||| || ||||| ||||||| || |||| ||||| || ||||| Sbjct 387 GACCAGGCGTACCGAAAGTCGGTGCCGGCAAGGCCTCGGCGAAGAACAGCCGGTC 441 >seq25560 Length=280 Score = 181 bits (200), Expect = 3e-43 Identities = 111/118 (94%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 CGACGTTCGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAAGTGCATGATCTTCT 60 ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 158 CGACGTTGGGGCTCTGGAAGCCGACGTCATAGATATGGAAGCCCAGGTGCATGATCTTCT 217 Query 61 GGTCCAGGTGCAGGTAGGGGTAGTTCCCGTCCACTGGCAGCGACGGCGCCAGCTTCAC 118 |||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||| Sbjct 218 GGTCCAGGTGCAGGTACGGGTAGTTGCCGTCCACCGGCAGCGACGGCGCCAGTTTCAC 275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241249533568