Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq196 196 4e-48 seq140 145 6e-33 seq103 102 7e-20 >seq196 Length=562 Score = 196 bits (216), Expect = 4e-48 Identities = 140/161 (87%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||| Sbjct 247 TCGAGTTGCAGACTGCGATCCGGACTACGATCGGTTTTCTGGGATTAGCTCCACCTCGCG 188 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | ||||| ||||||||| ||||||||| ||||||| ||||| || ||||||||| Sbjct 187 GCTTGGCAACCCTCTGTACCGACCATTGTAGCACGTGTGTAGCCCAGGCCGTAAGGGCCA 128 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||||||||||||||||||||||||||||| Sbjct 127 TGATGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 87 >seq140 Length=166553 Score = 145 bits (160), Expect = 6e-33 Identities = 131/162 (81%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| | ||||||| ||| ||| |||| | ||||||||| ||||||| Sbjct 3519 TCGAGTTGCAGAGTGCAATCCGAACTGAGATGG-CTTTTGGAGATTAGCTCGACCTCGCG 3577 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||| |||| ||||||||| ||||||| ||||| ||| ||||||||| Sbjct 3578 GTCTCGCTGCCCACTGTCACCACCATTGTAGCACGTGTGTAGCCCAGCCCGTAAGGGCCA 3637 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTGTCAC 161 |||||||||||||||||||||||||||||| ||| || |||| Sbjct 3638 TGAGGACTTGACGTCATCCCCACCTTCCTCTCGGCTTATCAC 3679 >seq103 Length=5517 Score = 102 bits (112), Expect = 7e-20 Identities = 118/158 (75%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| | ||||| ||| || |||| || |||| ||| | | || Sbjct 1627 TCGAGTTGCAGACCTCTATCCGAACTGTGAATGGCTTTTTGAGATTCGCTTGCTGTTGCC 1568 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||||||||| |||||||| ||||||| ||||| | ||||||||| Sbjct 1567 AGCTTGCTGCCCTCTGTACCATCCATTGTAGCACGTGTGTAGCCCCGGACGTAAGGGCCA 1508 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTG 157 ||| ||||||||||| ||||| |||||||| | ||||| Sbjct 1507 TGATGACTTGACGTCGTCCCCTCCTTCCTCTCTGTTTG 1470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415886245190