Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq140 260 2e-67 seq103 190 3e-46 seq554 73.4 7e-11 >seq140 Length=166553 Score = 260 bits (288), Expect = 2e-67 Identities = 227/282 (80%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | |||| | ||||||||||||||||||| Sbjct 4070 CCCACGCTTTCGCACCTCAGCGTCAGTATCGAGCCAGTGAGCCGCCTTCGCCACTGGTGT 4129 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 ||||||| ||||||||| |||||||| |||||| ||||||||| | |||||| | || Sbjct 4130 TCCTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCACCTCTCTCGAAC 4189 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 |||||| | |||| ||||| |||| ||||||||||| | |||||| |||||| Sbjct 4190 TCAAGACTACCAGTATCAAAGGCAGTTCCGGGGTTGAGCCCCGGGATTTCACCCCTGACT 4249 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | |||||||| || |||||| |||| |||||||| | |||||| ||| ||| || Sbjct 4250 TAATAGTCCGCCTACGTGCGCTTTACGCCCAGTAAATCCGAACAACGCTAGCCCCCTTCG 4309 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct 4310 TATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTC 4351 >seq103 Length=5517 Score = 190 bits (210), Expect = 3e-46 Identities = 223/295 (76%), Gaps = 10/295 (3%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| |||||||||||| | || || || | |||||||| | ||||| Sbjct 1082 CCCACGCTTTCGTGCCTCAGCGTCAATAACACCATAGTAAGCTGCCTTCGCAATCGGTGT 1023 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACA---CACGGAATTCCGATTGCCTCTCCAG 117 || ||||||| ||||||||||||||| ||| |||||| | ||||| | Sbjct 1022 TCTGTGACATATCTATGCATTTCACCGCTACTTGTCAC---ATTCCGCCTACCTCTAGTG 966 Query 118 CACTCAAGAAAAACAGTTTCAAATGCAG-GCTATGGGTTGAGCCCATAGT-TTTCACATC 175 | ||||| | |||| |||| ||| || |||| ||||||| | || |||||| | Sbjct 965 TATTCAAGCTCATCAGTATCAAGGGCACTGCGATGG-TTGAGCC-ACCGTCTTTCACCCC 908 Query 176 TGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCAC 235 |||||| |||||||| | ||||||| ||||||||||||||||||||||||| | Sbjct 907 TGACTTAATAAGCCGCCTACGCACCCTTTAAACCCAATAAATCCGGATAACGCTTGGATC 848 Query 236 CTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 || |||||||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct 847 CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTATTCCTTCGGTA 793 >seq554 Length=647 Score = 73.4 bits (80), Expect = 7e-11 Identities = 111/158 (70%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 62 CCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACT 121 ||||| || |||||||||||||| ||||||| |||||||| | ||||| | |||| Sbjct 647 CCTCCCGATCTCTACGCATTTCACTGCTACACCGGGAATTCCACTACCCTCTACCACACT 588 Query 122 CAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTT 181 | || |||| || | |||| ||||||||||| | ||||||| | ||||| Sbjct 587 CTAGTTGCCCAGTATCCACTGCAATTCCCAGGTTGAGCCCAGGGCTTTCACAACAGACTT 528 Query 182 GCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCC 219 || ||||| | | |||||| |||| ||| ||| Sbjct 527 AAACAACCACCTACGCACGCTTTACGCCCAGTAATTCC 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828573365417