Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq552 140 2e-31 seq103 111 1e-22 seq140 107 1e-21 >seq552 Length=650 Score = 140 bits (154), Expect = 2e-31 Identities = 116/139 (83%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||| Sbjct 479 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTA 420 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | ||| ||||||| |||||| | |||||||| || ||| | Sbjct 419 CTTTCGTACCTGCTCGACGTGTCTGTCTCGCAGTCAAGCGCGCTTTTGCCTTTATACTCT 360 Query 121 CACTAC-GATTTCCGACCG 138 || || |||||||||||| Sbjct 359 -ACGACCGATTTCCGACCG 342 >seq103 Length=5517 Score = 111 bits (122), Expect = 1e-22 Identities = 113/142 (80%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| || | ||||||||||||||| || Sbjct 4824 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCAGAACCACCGGATCACTATATCCGT 4765 Query 61 CTTTCGCATCTGCTCTAGTTGT-TGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT- 118 |||||| |||||| |||| ||| ||| || ||||||| ||| ||| |||||||| Sbjct 4764 CTTTCGACCCTGCTCGGCTTGTCTGC-CTCACAGTCAAGCAAGCTTATGCTATTGCACTC 4706 Query 119 ATCACTACGATTTCCGACCGTA 140 ||| |||| || || | |||| Sbjct 4705 CTCA-TACGGTTACCAAGCGTA 4685 >seq140 Length=166553 Score = 107 bits (118), Expect = 1e-21 Identities = 102/128 (80%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 12 CGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTCGCATCT 71 ||||||||||||||||||||| | ||||||||||||||||||| |||||| ||| Sbjct 1 CGTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGACCGACTTTCGTCTCT 60 Query 72 GCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTATCACTA-CGATT 130 |||| | |||| ||||||| ||| || ||| |||||||||||| || | ||||| Sbjct 61 GCTCGACTTGTCAGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACT-CGACGACCGATT 119 Query 131 TCCGACCG 138 |||||||| Sbjct 120 TCCGACCG 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351906850900