Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq552 150 2e-34 seq140 138 1e-30 seq103 120 3e-25 >seq552 Length=650 Score = 150 bits (166), Expect = 2e-34 Identities = 127/156 (81%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||||| Sbjct 467 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTACTTTCGTACCTG 408 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| ||| |||||||||||||| |||| |||| || ||| | |||| || Sbjct 407 CTCGACGTGTCTGTCTCGCAGTCAAGCGCGCTTTTGCCTTTATACTCTACGACCGATTTC 348 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| |||||||| ||||||||||| Sbjct 347 CGACCGGTCTGAGCGCACCTTCGTACTCCTCCGTTA 312 >seq140 Length=166553 Score = 138 bits (152), Expect = 1e-30 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | | |||||||||||||||||||| |||||| ||| Sbjct 2 GTTGAGCGATGGCCCTTCCACGCGGGACCACCGGATCACTATGACCGACTTTCGTCTCTG 61 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| ||||||||||| || ||||||||||||||||| | |||| || Sbjct 62 CTCGACTTGTCAGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCGACGACCGATTTC 121 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| ||| ||| || ||||||||| Sbjct 122 CGACCGGTCTGAGCCCACCATCGCGCGCCTCCGTTA 157 >seq103 Length=5517 Score = 120 bits (132), Expect = 3e-25 Identities = 122/157 (78%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||||||||||||| |||||||||||||||||||| || |||||| ||||| Sbjct 4811 TTGAGCGATGGCCCTTCCATGCAGAACCACCGGATCACTATATCCGTCTTTCGACCCTGC 4752 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTC--ACGATGT 142 ||| ||| ||| ||||||||| ||||||||| |||||||| |||| ||| | Sbjct 4751 TCGGCTTGTCTGCCTCACAGTCAAGCAAGCTTATGCTATTGCACT--CCTCATACGGTTA 4694 Query 143 CCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 || | ||| | |||| ||||| | ||||||||| Sbjct 4693 CCAAGCGTATTGAGCTTACCTTTGAAAGCCTCCGTTA 4657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473470494524