Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001951.1 Length=416 Score E Sequences producing significant alignments: (Bits) Value seq6923 369 9e-100 seq19838 183 7e-44 >seq6923 Length=1774 Score = 369 bits (408), Expect = 9e-100 Identities = 240/264 (91%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 1 TCCATCCCAACGCCATGACCCAGGTGGTGTTTGGCGAAAACGGCGAGCTGCACCGCGACA 60 |||| || || |||||||||| ||||||||| || || |||||||||||||||||||||| Sbjct 264 TCCACCCTAATGCCATGACCCTGGTGGTGTTCGGTGATAACGGCGAGCTGCACCGCGACA 205 Query 61 CCTATTACTCGGTGGGTGGCGGTTTCGTGGTGGATGAAGCCCAGGCCCAAAGCGGTGTGG 120 |||| ||||||||||| ||||| |||||||||||||||||||||||| | ||||| |||| Sbjct 204 CCTACTACTCGGTGGGCGGCGGATTCGTGGTGGATGAAGCCCAGGCCAACAGCGGCGTGG 145 Query 121 CGGACATGGACCGTACCGAGCTGCCCTATGATTTTTCCAGTGCCGTGGAGCTGTTGCAGC 180 ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||| Sbjct 144 CGGACATGGACCGCACCGAGCTGCCCTATGATTTTTCCAGTGCGGTGGAACTGCTGCAGC 85 Query 181 TGTGCAAGACCCACAACCTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCTGGC 240 ||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||| Sbjct 84 TGTGCAAGACCCACAACCTGCGCGTCGCTGAGCTGATGTTGGCGAATGAAAAAACCTGGC 25 Query 241 GCAGCGAAGAAGAAATCCGCAGCG 264 || ||||||||||||||||||| Sbjct 24 GCTCGGAAGAAGAAATCCGCAGCG 1 >seq19838 Length=1292 Score = 183 bits (202), Expect = 7e-44 Identities = 294/418 (70%), Gaps = 6/418 (1%) Strand=Plus/Plus Query 2 CCATCCCAACGCCATGACCCAGGTGGTGTTTGGCGAAAACGGCGAGCTGCACCGCG-ACA 60 ||| |||||||||||| ||| | | | |||||||||||| | || | || | | | Sbjct 119 CCACCCCAACGCCATGTCCCTGCATGCCTACGGCGAAAACGGCCCGTTG-AGCGAGCAAA 177 Query 61 CCTATTACTCGGTGGGTGGCGGTTTCGTGGTGGATGAAGCCCAGGCCCAAAGCGGTGTGG 120 | || ||||||||||| ||||||||| | | || | || | ||| | |||| | | Sbjct 178 CGTACTACTCGGTGGGCGGCGGTTTCATCATCGAAGCGGCAGAAGCCGAGTCCGGTATCG 237 Query 121 CG--GACATGGACCGTACCGAGCTGCCCTATGATTTTTCCAGTGCCGTGGAGCTGTTGCA 178 || ||| | || | | ||||||| || ||||| || ||||| || ||| || Sbjct 238 CGCCGACCAGCGAAGTGC--AATTGCCCTACGACTTTTCGAGCGCCGTCGAACTGCTGGC 295 Query 179 GCTGTGCAAGACCCACAACCTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCTG 238 ||||||| | ||| |||||| ||| |||| |||||| |||| || || |||| Sbjct 296 CTTGTGCAACAAGCACGGCCTGCGGGTTTCCGAGCTGATGATGGCCAACGAGCGGGCCTG 355 Query 239 GCGCAGCGAAGAAGAAATCCGCAGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATTG 298 ||||||||| | || ||||||||||||||| || | ||||| | |||| || || Sbjct 356 GCGCAGCGATGCCGAGATCCGCAGCGGCCTGCTGCATATCTGGTCGGTGATGCGTGAATG 415 Query 299 CGTGGAGCAGGGCCTCAAGCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTCG 358 ||| || || ||||| |||||||| |||||||||||||| || | |||| || || Sbjct 416 CGTCGAACAAGGCCTGCGCCACGAAGGCATCCTGCCCGGCGGTCTGGATGTGCCACGGCG 475 Query 359 CGCTGCCAAGTTACACCGCAGCTTGCAGGAGCTGAACAAGCCCAATGTGATCGGCTCG 416 ||| || || || ||||||||| ||| ||| | ||| ||||| || ||| |||| Sbjct 476 CGCGGCGAAATTGCACCGCAGCCTGCTGGAAATCGGCAAACCCAACGTTATCACCTCG 533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1228453146624