Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq103 316 3e-84 seq12757 201 2e-49 seq7639 140 5e-31 seq552 136 6e-30 seq3591 111 2e-22 >seq103 Length=5517 Score = 316 bits (350), Expect = 3e-84 Identities = 229/265 (86%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 11 TTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACT 70 |||| ||||||||| |||||| |||||| |||| | | ||||| | | || |||| | Sbjct 5150 TTCGCACTTAGATGCTTTCAGCGCTTATCTATTCCCAGCGTAGCTACTCTGCAATGCCCC 5091 Query 71 TGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAG 130 |||| | ||||| | | ||| ||||| | ||||| ||||||||||||||||||||| ||| Sbjct 5090 TGGCGGAACAACAGATTCACTAGAGGCTAGTCCAACCCGGTCCTCTCGTACTAAGGTCAG 5031 Query 131 CTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTG 190 | || |||||| ||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 5030 CCCCACTCAAAATTCCTACGCCCACAACAGATAGGGACCGAACTGTCTCGCGACGTTCTG 4971 Query 191 AACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGC 250 ||||||||||||||||| ||||||| ||||||||||| |||||||||||||| || |||| Sbjct 4970 AACCCAGCTCGCGTGCCACTTTAATCGGCGAACAGCCGAACCCTTGGGACCTTCTCCAGC 4911 Query 251 CCCAGGATGAGACGAGCCGACATCG 275 ||||||||| ||||||||||||||| Sbjct 4910 CCCAGGATGTGACGAGCCGACATCG 4886 >seq12757 Length=1006 Score = 201 bits (222), Expect = 2e-49 Identities = 178/221 (81%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| | ||||| |||||||||| |||||| ||||| ||||| ||| ||||| ||| | Sbjct 245 GAGGCGCGCTTCCCGCTTAGATGCTTTCAGCGGTTATCGCTTCCGAACATAGCTACCCGG 186 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | |||| |||| ||||| || ||||||||||| ||||| ||||||||||||||| Sbjct 185 CAATGCCACTGGCGTGACAACCGGAACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTAC 126 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || | |||| || |||| | ||| |||||||| | |||||||||||||||||||| | Sbjct 125 TAGGAGCAGCCCCCCTCAGTTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCAC 66 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTT-AATGGGCGA 221 |||||||| |||||||||||||| || |||| |||| |||| Sbjct 65 GACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGCGCGA 25 >seq7639 Length=616 Score = 140 bits (154), Expect = 5e-31 Identities = 125/157 (80%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| |||| ||| ||||| ||| || |||| |||| Sbjct 460 GCTTAGATGCTTTCAGCGGTTATCTATTCCGAACATAGCTACCCGGCAATGCCACTGGCG 519 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| || ||||||||||| ||||| ||||||||||||||||| | |||| ||| Sbjct 520 TGACAACCGGAACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCT 579 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAA 172 ||||||| || ||| ||||| | ||||||||||||| Sbjct 580 CTCAAATCTCAAACGTCCACGGCAGATAGGGACCGAA 616 >seq552 Length=650 Score = 136 bits (150), Expect = 6e-30 Identities = 96/110 (87%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 166 GACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAG 225 |||||||||||||| |||||||||||||||| ||| ||| || |||||| ||||||||| Sbjct 650 GACCGAACTGTCTCACGACGTTCTGAACCCAACTCACGTACCGCTTTAAATGGCGAACAG 591 Query 226 CCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || ||||||||||||| || ||||||||||||| || ||| |||||||| Sbjct 590 CCATACCCTTGGGACCTGCTCCAGCCCCAGGATGCGATGAGTCGACATCG 541 >seq3591 Length=784 Score = 111 bits (122), Expect = 2e-22 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 3 AGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC 62 ||| ||| ||| ||||||||||||||||| ||||||| ||| | ||||| ||| || Sbjct 123 AGGTGGGTTTCCCGCTTAGATGCCTTCAGCGGTTATCCCGTCCGTATATAGCTACCCTGC 64 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 ||||| |||| ||||| ||| |||||||| | ||||||||||||||||||||||| Sbjct 63 TATGCGGCTGGCGCCACAACAGGTCCACCAGAGATACGTCCATCCCGGTCCTCTCGTACT 4 Query 123 A 123 | Sbjct 3 A 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780586490972