Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq13720 378 1e-102 seq3385 129 9e-28 >seq13720 Length=1082 Score = 378 bits (418), Expect = 1e-102 Identities = 255/284 (90%), Gaps = 1/284 (0%) Strand=Plus/Minus Query 1 TACGCCTTGCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCT 60 |||||| |||||||||||||||||||||| |||||||| || |||| | | || ||||| Sbjct 732 TACGCCCTGCGGCCGCTGGATTTCGCGGTATTCCCGACC-ATCCTGCTGATCGCCACCCT 674 Query 61 GCTACGTCTGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGG 120 ||| || ||||| | ||||| || ||||| ||||||||||||||||||||||||||||| Sbjct 673 GCTGCGGCTGGCGCTTAACGTGGCTTCCACCCGGGTGGTGATGCTCCACGGCCAGGACGG 614 Query 121 CCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTA 180 ||| ||||| || || ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 613 CCACGCCGCCGCGGGCAAGGTGATCCAGGCCTTTGGCGAGGTGGTGATCGGCGGTAACTA 554 Query 181 CGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAA 240 |||||||||||||||||| || |||||| |||||||||||||||| ||||| |||||||| Sbjct 553 CGTGGTCGGTATCGTGGTTTTTGCGATCTTGATGATCATCAACTTCGTGGTCGTGACCAA 494 Query 241 GGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 493 GGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGTTTTACCCTCG 450 >seq3385 Length=9449 Score = 129 bits (142), Expect = 9e-28 Identities = 195/276 (71%), Gaps = 1/276 (0%) Strand=Plus/Minus Query 9 GCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTC 68 ||| ||||| |||||| ||| ||| |||||| | |||| | | || ||| || | || | Sbjct 9166 GCGCCCGCTCGATTTCTCGGCGTTTCCGACGG-TGCTGCTGATTGCCACCATGATGCGCC 9108 Query 69 TGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCG 128 || | | ||| |||| | || || || | | ||||||| | || ||| |||||| Sbjct 9107 TGTCGCTCAACATCGCGACAACCCGCGTCATCCTCACCCACGGCGATGAAGGCTATGCCG 9048 Query 129 CTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCG 188 | ||||| |||||||||| | ||| || | || || ||||| ||| ||| ||| Sbjct 9047 CCGCCGGGCAGGTGATCCACGGTTTCTCCCAGTTCGTTATGGGCGGCGACTTCGTCATCG 8988 Query 189 GTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCG 248 | ||||||| || || |||||||| ||| |||| || | || | |||||||||||| Sbjct 8987 GCCTCGTGGTCTTTGCCATCCTGATCATCGTCAATTTCCTCGTCATCACCAAGGGCGCCA 8928 Query 249 GGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 ||| || | || || |||||||||| || |||| Sbjct 8927 CGCGCATCGCGGAAGTCGGCGCGCGGTTCACGCTCG 8892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 809378615639