Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq12958 681 0.0 seq1586 109 2e-21 seq282 86.0 2e-14 >seq12958 Length=816 Score = 681 bits (754), Expect = 0.0 Identities = 495/570 (87%), Gaps = 4/570 (1%) Strand=Plus/Plus Query 4 TCGACCGTCGAGTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTC 63 |||||| ||| |||| ||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct 188 TCGACCATCGTGTTCTGGTCGTTCCGGGTCATGGTGGGCCTGGGCTTCCTGATGATCTTC 247 Query 64 ACCGGTCTAGTTCAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGT 123 ||||| || |||||||| ||||| |||||| |||||||||||||||||||||||||||| Sbjct 248 ACCGGCCT-GTTCAGCCTCTGGCT-GCGCCGTGGCGACAAGATGTACACGTCCAAGCCGT 305 Query 124 TCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGT 183 |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 306 TCCTGTACCTGGCGCTGTGGATGGGCCCGTCCGGCCTGATCGCGATTCTCGCCGGCTGGT 365 Query 184 TCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATG 243 ||||||| || |||||||| |||||||||||||||||||| |||||||||||||| || | Sbjct 366 TCACCACCGAGATCGGCCGACAGCCGTGGGTGGTCTACGGGCTGATGCGCACGGCAGACG 425 Query 244 CGTCCTCCGGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGT 303 | || ||| || || | | |||||||| |||||| |||||||||| |||||||||| Sbjct 426 CCTCGTCCAACCACAGTTTTGCGCAGATGAGCATTACGTTGGTGTTGTTTGTGGTGGTGT 485 Query 304 ACTTCGCGCTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCGC 363 ||||||||| |||||| || || |||||||||||||||||||||||||||||||| || Sbjct 486 ACTTCGCGCAGTTCGGCGCGGGCCTGGGCTACATGATGCGCCTGGTGCGCAAAGGGCCTG 545 Query 364 AGACCCACGAAGGCGATGAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCCAGCCC 423 |||||||||| || ||||| ||||||||||| ||||| ||||||||||| || || | Sbjct 546 TGACCCACGAAAGCACCGAGCCCACCCACGGTGGCCCTGGGCAGAAACGCACACCGGCGC 605 Query 424 GTCCGTTGTCTGCCGCCGATGATGGCAGCGATGACGACCACACCCACATCCAGCACAAGG 483 |||||||||| || || ||||| | ||||| ||| ||| | ||| | | |||||| Sbjct 606 GTCCGTTGTCGGCGGCTGATGACAGTGCCGATGCCGATCACGGCGACACCTTGAACAAGG 665 Query 484 GGCATTGAG--ATGGGTATTGATCTTCCGCTGATCCGGGCCGTGATCATCATCTTCGGCA 541 || | |||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 666 GGAACTGAGCCATGGGTATTGATCTTCCGCTGATCTGGGCCGTGATCATCATCTTCGGCA 725 Query 542 TCATGATGTACGTGGTCATGGACGGCTTCG 571 |||||||||||||||||||||||||||||| Sbjct 726 TCATGATGTACGTGGTCATGGACGGCTTCG 755 >seq1586 Length=6831 Score = 109 bits (120), Expect = 2e-21 Identities = 197/287 (69%), Gaps = 1/287 (0%) Strand=Plus/Plus Query 79 CCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGTTCCTGTACCTGGCGT 138 || |||||| ||| || |||||| | | ||| || |||||| | | | || Sbjct 2785 CCTGTGGCT-GCGTCGCGGCGACCGGCTATACCACTCGCGGCCGTTTCAGCGTTTTGCCC 2843 Query 139 TGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGTTCACCACGGAAATCG 198 |||||||||| || ||||| ||||||| ||||||||||||||| | ||||| || | | Sbjct 2844 TGTGGATGGGGCCATCCGGCCTGATCGCTATTCTCGCCGGCTGGGTGACCACCGAGGTGG 2903 Query 199 GCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATGCGTCCTCCGGGCATA 258 |||| || || |||||||| || ||| | |||||| || ||||| |||| ||| Sbjct 2904 GCCGCCAACCCTGGGTGGTGTATGGCGTTCAGCGCACCGCCGATGCCGTTTCCGCTCATG 2963 Query 259 GCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGTACTTCGCGCTGTTCG 318 || |||| ||| || | | | || || | || |||||| ||| | |||| Sbjct 2964 GCGATCTGCATATGTCGGTCAGTTTATTGACCTTTATCGTAGTGTACAGCGCCGTCTTCG 3023 Query 319 GTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCGCAG 365 | | ||| |||| ||| |||||||| | ||||| || |||||| Sbjct 3024 GCGTCGGCTACAGCTATATGCTGCGCCTGATCCGCAAGGGGCCGCAG 3070 >seq282 Length=9039 Score = 86.0 bits (94), Expect = 2e-14 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 135 GCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGTTCACCACGGAA 194 ||| | || ||||| || |||| | || || | ||||||| ||| | ||||| || Sbjct 7726 GCGCTCTGTATGGGGCCCGCCGGTCTTATTGCCCTGGTCGCCGGGTGGGTGACCACCGAG 7667 Query 195 ATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATGCGTCCTCCGGG 254 || ||||| |||||||||||| | ||||| || |||||||| ||||||| || | Sbjct 7666 ATGGGCCGCCAGCCGTGGGTGATATACGGGTTGTTGCGCACGCGGGATGCGGTGTCGTTG 7607 Query 255 CATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGTACTTCGCGCTG 314 || ||| |||||||| | || | ||| || | || | ||||| |||| ||| || Sbjct 7606 CACAGCACCCTGCAGATGGCCATCAGCCTGCTGGTATTTATCGTGGTTTACTGCGCCGTG 7547 Query 315 TTCGG 319 || || Sbjct 7546 TTTGG 7542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1724313140704