Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq15793 275 1e-71 seq320 147 4e-33 >seq15793 Length=895 Score = 275 bits (304), Expect = 1e-71 Identities = 194/220 (88%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 128 AGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGCCAGGCCGTCCTCGCCCCAA 187 |||||||||||||| || || |||||||| ||||| ||||||||||| ||||||||||| Sbjct 895 AGGCCCAGGCACCAGCGCTGGGCCTTGTCGCTGAAGCCCGCCAGGCCATCCTCGCCCCAG 836 Query 188 CGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCCCAGGCGTCGCCATCGGCG 247 ||||||||||||||||| || || || |||||||||||| |||||| ||||| |||||| Sbjct 835 CGGTAGGCGCGGCTGCGGGCGTGCTCGTGGGGGAAGTAGCGCCAGGCATCGCCGTCGGCG 776 Query 248 CTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGGTAGGGGCCCCACTCGCGC 307 ||||||||||||||||||||||||||||| || |||||||||||||||||||| || ||| Sbjct 775 CTGTAGTCTTCGCGCACCGTGCCCCATTGCCGCTCGCTCAGGTAGGGGCCCCAGTCACGC 716 Query 308 CAGCGCTCGGCGTC--GCTGGTTGCCAGGCGTTGGCCTTC 345 ||||||||| |||| ||| | |||||||| |||||||| Sbjct 715 CAGCGCTCGCCGTCAGGCT--TGGCCAGGCGCTGGCCTTC 678 >seq320 Length=1960 Score = 147 bits (162), Expect = 4e-33 Identities = 92/99 (93%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 101 TTCGCCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATCGCGTC 42 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTG 147 ||||||||||||||| ||||||||||||||||| || || Sbjct 41 GCGCTCGTTCCACAGCGCCAGGCCCAGGCACCAGCGCTG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007715471840