Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq9916 158 2e-36 seq112 150 3e-34 >seq9916 Length=880 Score = 158 bits (174), Expect = 2e-36 Identities = 162/208 (78%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 ||||||||||||||||||||||| | |||| |||||||||||||||||| | || || || Sbjct 880 AGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGATAAAGTCAGCG 821 Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 | | | |||| || ||| | ||||| | || || | ||||||| | ||||| Sbjct 820 TG--CGTTTCCTTTCTCGAAAGAGATTGGTAAACCAGTGAATGTTTGTCGTGATTGGGAT 763 Query 242 AGAGCATTGCAATTATTGCTCT-TCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA 300 | |||||||||||| ||| | |||||||||| || |||||| | | ||||||| | Sbjct 762 CGGAAATTGCAATTATTT-TCTGTGAACGAGGAATTCCAAGTAAGTGTGAGTCATCAACT 704 Query 301 CGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||||||| Sbjct 703 CGCGCTGATTACGTCCCTGCCCTTTGTA 676 >seq112 Length=13817 Score = 150 bits (166), Expect = 3e-34 Identities = 191/260 (73%), Gaps = 7/260 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||| |||||| | | ||||| | ||||||| || ||||||||||||||||| Sbjct 9169 CTTCTTAGAAGGACTACCTACCTCAAGTGGGGGGAAGTTGGACGCAATAACAGGTCTGTG 9110 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG--ACAGAGCCAACGAGTTCAT 188 |||||||||||| ||||| ||||||||| |||| || |||||| || | || Sbjct 9109 ATGCCCTTAGATACCTTGGGCTGCACGCGCGTTACAATGTAACAGAGAAAAAGGCTT--- 9053 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 || || | |||| | | ||||||| | || || ||| | ||||| || | | Sbjct 9052 -TCCATGTCTGGAAAGACATGGTAATCAATTGAATCTACTACGTAATAGGGATTGATCTT 8994 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||||| | || |||||||||||| ||| ||||||| ||||| | | || ||| Sbjct 8993 TGTAATTATCGATCATCAACGAGGAATTCCTTGTAAGCGTAAGTCATTACCTTACGCTGA 8934 Query 309 TTACGTCCCTGCCCTTTGTA 328 || |||||||||||||||| Sbjct 8933 ATATGTCCCTGCCCTTTGTA 8914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946932633856