Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq25 253 4e-65 seq759 145 1e-32 seq103 132 9e-29 seq140 113 8e-23 seq27338 87.8 3e-15 seq10025 80.6 5e-13 >seq25 Length=2002 Score = 253 bits (280), Expect = 4e-65 Identities = 255/329 (78%), Gaps = 18/329 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | | |||||||||| ||||| ||||| ||||| | Sbjct 366 AGCGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGGTAGCCTGCGAAA 425 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| |||||||| ||||||| ||||||||||| |||| || |||||||| ||||| || Sbjct 426 AGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGC 485 Query 121 CCT------TTGGGT-CATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAA 173 | | ||| | | || || |||||||||||||| | ||||||| || ||| Sbjct 486 CATCATAAGATGGTTACCTTACA--CTGAATACATAGGTGTATGGAGCGAACCAGGGGAA 543 Query 174 CTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGA 233 |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| Sbjct 544 CTGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGA 603 Query 234 GCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAA 290 ||||| |||| |||| ||| ||| | |||| ||| |||| ||||||||| Sbjct 604 GCGAACGGGGACTAGCCCTTA------AGTGGCTTTGAGATTAGCGGAACGCTCTGGAAA 657 Query 291 TAGGAGCCATAGCGGGTGATAGCCCCGTA 319 | ||||||| |||||||||||| ||| Sbjct 658 GTGCGGCCATAGTGGGTGATAGCCCTGTA 686 >seq759 Length=755 Score = 145 bits (160), Expect = 1e-32 Identities = 186/254 (73%), Gaps = 13/254 (5%) Strand=Plus/Minus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||| |||||||||| |||| | | |||||||||||||||| || ||||| |||| Sbjct 719 ACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGAAAAGCGT 660 Query 66 CGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT 124 ||| || ||| | || || | ||| ||| ||||||||||||||||| | | Sbjct 659 CGGTAAGGTGATATGA-ACCGTTATAACCGGCGATGTCCGAATGGGGAAACCCAGTGCAA 601 Query 125 TGGGTCATTGCATG--------CTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTG 176 | || ||||| |||||||||||||| | | |||||| || |||||| Sbjct 600 T---TCGTTGCACTATCGTTAACTGAATACATAGGTTAACGAGGCGAACCGGGGGAACTG 544 Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 ||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||| Sbjct 543 AAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCG 484 Query 237 AAATGGGATGAGCC 250 || |||| |||| Sbjct 483 AACGGGGAGCAGCC 470 >seq103 Length=5517 Score = 132 bits (146), Expect = 9e-29 Identities = 184/251 (73%), Gaps = 15/251 (6%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| | |||||||||||| | | |||||||||||||||| || ||||||| Sbjct 2404 AGAGCACACAGGGGATGCCTTGGCTCTCAGAGGCGATGAAGGACGTGATAAGCTGCGATA 2463 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| |||||| | |||||| | || ||||| ||||||||||||||||||||| ||| Sbjct 2464 AGCTCCGGGGA-TTAGCAAATATGAATTAATCCGGAGATTTCCGAATGGGGAAACCTGGC 2522 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 | | | | | | | |||| | ||| ||| ||| | |||||||||| Sbjct 2523 ----TAGTTGAAGACTAGTCG--TACA-AAGTACGCA-----AACCTGCTGAACTGAAAC 2570 Query 181 ATCTAAGT-AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 |||||||| ||| | ||||| ||||| || |||| || |||||||||||||||||| Sbjct 2571 ATCTAAGTAAGCAG-AGGAAGAGAAAATAATAATGATTTCCTAAGTAGTGGCGAGCGAAA 2629 Query 240 TGGGATGAGCC 250 || | ||||| Sbjct 2630 GGGAAAGAGCC 2640 >seq140 Length=166553 Score = 113 bits (124), Expect = 8e-23 Identities = 96/117 (82%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||| |||||||||||||||||| || ||||||| Sbjct 2477 AGGGCATTTGGTGGATGCCTTGGCATGCACAGGCGATGAAGGACGTGATACGCTGCGATA 2418 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 ||| ||||||| | || || || |||||||||| ||||||||||||||||||||| Sbjct 2417 AGCGTCGGGGAG-GTGCGAATACCCTTTGATCCGACGATTTCCGAATGGGGAAACCC 2362 Score = 105 bits (116), Expect = 1e-20 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 141 GAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAA 200 ||||||||||| | |||||||| ||| ||||||||||||||||||| | | |||||| Sbjct 2149 GAATACATAGGGGTTAGAAGCGAACCCGGGGAACTGAAACATCTAAGTACCCGGAGGAAA 2090 Query 201 AGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 || ||||| ||||| ||| ||||||||||||||||| Sbjct 2089 GGACATCAAACGAGACTCCGTAAGTAGTGGCGAGCGAA 2052 >seq27338 Length=251 Score = 87.8 bits (96), Expect = 3e-15 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| || ||||||||||||||| || |||||||||| |||| Sbjct 177 GGTGGATGCCTTGGCACCAGGAGCCGATGAAGGACGTAGGAGGCTGCGATAAGCCTCGGG 118 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| ||| | || ||||||| ||| ||||||||||||||||| || Sbjct 117 GAGCTGTCAACCGAGCTGTGATCCGAGGATGTCCGAATGGGGAAACCCAGC 67 >seq10025 Length=697 Score = 80.6 bits (88), Expect = 5e-13 Identities = 92/121 (76%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | || ||| ||||||||||| | ||||||| Sbjct 138 AGAGCAAACGGTGGATGCCTTGGCATCTGGAGCCGAAGAAGGACGTAGCAATCTGCGATA 197 Query 61 AGCTGCGGGG-AGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 ||| ||||| | ||| || || ||||||||| | | ||||||||||||||||| | Sbjct 198 AGCCTCGGGGAACTGA-TAAGCAAGTTTTGATCCGAGGGTGTCCGAATGGGGAAACCCCG 256 Query 120 C 120 | Sbjct 257 C 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918140763232