Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq5287 111 7e-19 >seq5287 Length=5323 Score = 111 bits (122), Expect = 7e-19 Identities = 173/244 (71%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 222433 GGCGTGGCCTACCTCCACTCGCGCA-CCCCGTCCATCATCCACCGCGACCTCAAGTCCAG 222491 ||||| |||||| ||| ||| ||||||| ||| | || |||||||||||||| Sbjct 2476 GGCGTCATCTACCTGCACAACAGCAACCCCGTC-ATCCTTCATCGCGACCTCAAGTCTCA 2534 Query 222492 CAACCTGCTCGTGGGCGACTCCCTGTCGATGAAGGTGGCCGACTTTGGGTTCGCGCGGAT 222551 ||||||||| || | ||| | | | | || |||||||||||||| | ||| Sbjct 2535 CAACCTGCTGGTCGATGACAACTGGAAGGTCAAAGTGGCCGACTTTGGTCTGAGTACGAT 2594 Query 222552 CAAGGAAACCAACGCCACCATGACACGGTGCGGCACGCCGTACTGGACGGCACCCGAGAT 222611 | || | || || || |||||| ||| ||||| || | |||||| ||||| || | Sbjct 2595 CGAGCAGACT---GCAACGATGACAGCGTGTGGCACACCATGCTGGACAGCACCGGAAGT 2651 Query 222612 CATCACCCAAGAGCGCTACACCGAGAAGGCCGACGTCTACTCGTTCGGCATCATCATGTG 222671 | | | || | |||||||||||||| |||||||||||||| | ||| ||||||| Sbjct 2652 GCTTCGCAACCAGAGATACACCGAGAAGGCTGACGTCTACTCGTTTGCTATCGTCATGTG 2711 Query 222672 GGAG 222675 |||| Sbjct 2712 GGAG 2715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083966847124146