Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq5287 109 2e-18 >seq5287 Length=5323 Score = 109 bits (120), Expect = 2e-18 Identities = 147/204 (72%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 78269 CACCGTGACGTGAAATCTTCCAATCTCTTGGTAGATGAATACTGGAACGTCAAGGTTGCC 78328 || || ||| | || ||| ||| || |||| ||||| ||||||| ||||| || ||| Sbjct 2515 CATCGCGACCTCAAGTCTCACAACCTGCTGGTCGATGACAACTGGAAGGTCAAAGTGGCC 2574 Query 78329 GATTTTGGCTTTGCTACCATGATTAAGGAACAAGCCACCATGACCAAGTGTGGCACGCCA 78388 || ||||| | ||| ||| || | || || ||||| ||||||||| ||| Sbjct 2575 GACTTTGGTCTGAGTAC---GATCGAGCAGACTGCAACGATGACAGCGTGTGGCACACCA 2631 Query 78389 GCCTGGAGCGCACCAGAAGTTCTTCTCAACAAAAAATACAATGAAAAGGCCGACGTCTAC 78448 ||||| ||||| ||||| |||| |||| | | ||||| || ||||| ||||||||| Sbjct 2632 TGCTGGACAGCACCGGAAGTGCTTCGCAACCAGAGATACACCGAGAAGGCTGACGTCTAC 2691 Query 78449 TCTTTCGGCATAGTCATGTGGGAG 78472 || || | || |||||||||||| Sbjct 2692 TCGTTTGCTATCGTCATGTGGGAG 2715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884204714929711