Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1605 163 6e-38 >seq1605 Length=39894 Score = 163 bits (180), Expect = 6e-38 Identities = 226/315 (72%), Gaps = 21/315 (7%) Strand=Plus/Minus Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 106 ||||||||| || ||||||| | ||| ||| ||||||||||||||||||| |||||| Sbjct 1930 GAGACAGTGGGGAAGTCGTTACATCATTCATGCAGGTCGGAACTTACCCGACAGGGAATT 1871 Query 107 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCT 166 ||||||||||||||||||||| ||||| ||||||||| || ||| | |||| Sbjct 1870 TCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTCACCAATCCTTTA-CTCAC---- 1816 Query 167 TCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATAC 226 || |||| | || | || | ||||||||| ||||| |||||| Sbjct 1815 ----AAGCAATAACTCGT-TTGTTTATCTAATGGTACCGGGCAGATGTCAGACTCTATAC 1761 Query 227 ATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCT 286 ||| | || | | |||||||| ||||||||||| |||||||||||| |||||||| Sbjct 1760 ATCATTTTTCAATTTAGCAGAGTCCTGTGTTTTTATTAAACAGTCGCTACCCCCTATTCT 1701 Query 287 CTGCGGCCTGTCATAGA----------CAGGCACCCCTTCTCCCTAAGTTACGGGGTCAT 336 | | | |||||| || |||| |||| |||| ||||||||| |||| Sbjct 1700 GTTACG-CACACATAGATTACTCTATGCAAGCACTCCTTTTCCCGAAGTTACGGAGTCAA 1642 Query 337 TTTGCCGAGTTCCTT 351 ||||||||||||||| Sbjct 1641 TTTGCCGAGTTCCTT 1627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062382948480