Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1605 143 8e-32 >seq1605 Length=39894 Score = 143 bits (158), Expect = 8e-32 Identities = 337/502 (67%), Gaps = 34/502 (7%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| |||||||||| ||||| ||| || ||||||||||| || Sbjct 5789 TACGGCCGCAAGGTTAAAACTCAAAGAAATTGGCGGAAGATCGTTTAAGCGGTGGAGTAT 5848 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG---ACATCCTCTG---- 113 |||||||||||||| ||||||| ||||||||||| ||| |||| || | Sbjct 5849 GTGGTTTAATTCGATAATACGCGAAAAACCTTACCAATCTTTGTGCACATTTTCGGTTCT 5908 Query 114 ---ACCCCTCTAG---AGATAGAGGTTTCCCCTTCGGGGGA-CAGAGTGACAGGTGATGC 166 | | | ||| | || ||||| | || ||| | | ||| |||| | ||| Sbjct 5909 ACAAAACTTGTAGCCCAAATTGAGGTGGTCAATTTGGGCTAGCTATGTGCCAGGCGTTGC 5968 Query 167 ATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCC 226 |||| |||||| |||||||||| | ||||| |||||| ||| |||| ||||||||| Sbjct 5969 ATGGCTGTCGTAAGCTCGTGTCTTAGGATGTGTGGTTAACTCCATGAACGGGCGCAACCC 6028 Query 227 TTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGG 286 || | ||||| || | || || || | | ||||| ||| || Sbjct 6029 TTGTTCCTAGTT-AGATTAGGAA--TGAAAACAGT--GAAAACTGCTTTTGA------GG 6077 Query 287 AGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCT 346 | || ||| | ||||| ||| ||| || |||| ||||||||||||||| || Sbjct 6078 A------TGAGGAGTATGTCAAGTCAATATGACCTTTATAGATTGGGCTACACACGTACT 6131 Query 347 ACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTT 406 |||| || ||||| | | | | | ||| |||| || ||||| | ||| | Sbjct 6132 ACAACGGTAGCTACAATGAGAAACAATGCCGTGAGGCGGAGTAAATCTCTAAAACCTACC 6191 Query 407 CTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTA 466 || |||||||||| | | || || | ||||||||| ||||||||||||||||| | Sbjct 6192 CT-AGTTCGGATTATTTTTTGAAA--TAAAAATATGAAGCCGGAATCGCTAGTAATCGCA 6248 Query 467 GATCAGCATGCTACGGTGAATA 488 | || ||| | ||||||||| Sbjct 6249 AAAAAGAATGTTGCGGTGAATA 6270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503975860800