Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1605 196 1e-47 >seq1605 Length=39894 Score = 196 bits (216), Expect = 1e-47 Identities = 245/334 (73%), Gaps = 3/334 (1%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| ||||||| | ||||||| |||||||| | |||| |||| | || ||| Sbjct 5180 ATTAGGCAGTTGGTGATGTAACGGATTACCAAGCCCGCGATGTTTAGCTGGTTTGGGAGA 5239 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| |||||| || ||||| | || | || || | |||||||||||||||| Sbjct 5240 ATGATCAGCCACAACGGGACTGAAAGACCGCCCGTCTTCTTTGAGGAGGCAGCAGTGGGG 5299 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC--CT 345 ||| ||| |||||| || ||||| |||| |||||| ||| || || |||| | || Sbjct 5300 AATCTTGGACAATGAGCGAAAGCTTGATCCAGCAATTTCGCATGTATGAAGAAGACCACT 5359 Query 346 TCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCG 405 || |||||| || ||| ||| ||||||||||||| ||| | |||||| | Sbjct 5360 AAACGTTGTAAAGTACTAGGCTCGGGGATAATAATGACGGTACCCGAGTAAAAAGCCCTG 5419 Query 406 GCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACT 465 |||||| ||||||||||| |||||||| ||| || |||| || ||||| || | | ||| Sbjct 5420 ACTAACTTCGTGCCAGCAGTCGCGGTAAAACGGAGAGGGCAAGTGTTATTCGTATTGACT 5479 Query 466 GGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 ||| ||||||||| |||||| |||| |||||| Sbjct 5480 -GGGTGTAAAGGGTACGTAGGCGGTTATTTAAGT 5512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497575963520