Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1605 150 4e-34 >seq1605 Length=39894 Score = 150 bits (166), Expect = 4e-34 Identities = 233/333 (70%), Gaps = 15/333 (5%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||||| | |||||| ||||||||||| |||||||| ||| || |||| || ||||| || Sbjct 5412 AAGCCCTGACTAACTTCGTGCCAGCAGTCGCGGTAAAACGGAGAGGGCAAGTGTTATTCG 5471 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 | | |||||| ||||||||| |||||| |||| |||||| | | ||| |||| Sbjct 5472 TATTGACTGGGTGTAAAGGGTACGTAGGCGGTTATTTAAGTTATAAAAAAAAAACTAT-- 5529 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 || || | | ||| | | ||||||| | ||||| | || | Sbjct 5530 -----------ATCTTTTTATAATACTATATGACTAGAGTTAAAAAGGGGATGGCGGTAC 5578 Query 193 TCCTAGTGTAGCGGTGAAATGCG-TAGATATTAGGAGGAACACCAGT-GGCGAAGGCGGC 250 | ||| ||| |||| || || | || ||| || ||| || || | ||||| ||| || Sbjct 5579 CTCCAGTTTAGAAGTGACATTCGTTTGAGATTGGGGGGACCAACAATAGGCGATGGCTGC 5638 Query 251 TTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATAC 310 || | | |||||| |||||| ||||||| |||||||| |||||||||||| || Sbjct 5639 TTTCCATTTTTATACTGACGCTGAGGTACGAAAGCATGGGGAGCGAACAGGATTAGAGAC 5698 Query 311 CCTGGTAGTCCACGCCGTAAACGATGAATACTA 343 |||||||||||| ||| | | | ||||||| || Sbjct 5699 CCTGGTAGTCCATGCCCTGACCTATGAATATTA 5731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203180688640