Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001185145.1_202015-07- 22] 1,605 sequences; 67,656,513 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq720 131 6e-25 seq1227 127 8e-24 >seq720 Length=140915 Score = 131 bits (144), Expect = 6e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 272063 TGCAGGAAATGCATGCCCTTGGCTGCTTGGTAGGCAATCTTGGCCTTGAGGATAAAAGGG 272122 || |||||||| | ||| |||| || || || ||||| | || | ||| || Sbjct 105033 TGAAGGAAATGTAAGCCTCTGGCGGCCTGCAGCGCCATCTTCACTTTCTTGGCAAACGGA 105092 Query 272123 ATCTCAGCAATGAGCTCATTGTGCAGCAGGTCGTACAGAGAACCCAGAGACATAAACTCC 272182 || ||| ||||||||| |||||||| | |||||||||||||| || ||| ||||| Sbjct 105093 ATGACAGGAATGAGCTCGTTGTGCAGAACATCGTACAGAGAACCGAGTTGCATGTACTCC 105152 Query 272183 ATCACAATGCACATCTTGGGAGGCTTGGTGCAAGCAGCCATGAAGAGAACCACGTTAGGA 272242 ||||| |||||||| || || |||| |||||||| |||||||| || |||||||| ||| Sbjct 105153 ATCACTATGCACATGTTCGGTGGCTGAGTGCAAGCCGCCATGAATAGCACCACGTTTGGA 105212 Query 272243 TGTCTAAGGGCGGTCATGAC 272262 || | ||| | ||||| || Sbjct 105213 TGACGAAGCTCTGTCATTAC 105232 >seq1227 Length=12999 Score = 127 bits (140), Expect = 8e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 272068 GAAATGCATGCCCTTGGCTGCTTGGTAGGCAATCTTGGCCTTGAGGATAAAAGGGATCTC 272127 |||||| | ||| |||| || || || ||||| | || | ||| || || | Sbjct 816 GAAATGTAAGCCTCTGGCGGCCTGCAGCGCCATCTTCACTTTCTTGGCAAACGGAATGAC 757 Query 272128 AGCAATGAGCTCATTGTGCAGCAGGTCGTACAGAGAACCCAGAGACATAAACTCCATCAC 272187 || ||||||||| |||||||| | |||||||||||||| || ||| |||||||||| Sbjct 756 AGGAATGAGCTCGTTGTGCAGAACATCGTACAGAGAACCGAGTTGCATGTACTCCATCAC 697 Query 272188 AATGCACATCTTGGGAGGCTTGGTGCAAGCAGCCATGAAGAGAACCACGTTAGGATGTCT 272247 |||||||| || || |||| |||||||| |||||||| || |||||||| ||||| | Sbjct 696 TATGCACATGTTCGGTGGCTGAGTGCAAGCCGCCATGAATAGCACCACGTTTGGATGACG 637 Query 272248 AAGGGCGGTCATGAC 272262 ||| | ||||| || Sbjct 636 AAGCTCTGTCATTAC 622 Score = 84.2 bits (92), Expect = 8e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 270652 GAGGAAAGCGACTTCTGCTCTAAACTCGAGCAT--GTTTCTCTCATCCATCTTTTGCTTT 270709 ||||||||| | ||| || | ||||| ||||| ||||||| | | ||| ||||| Sbjct 2802 GAGGAAAGCCATTTCAGCACGGAACTCCAGCATTCGTTTCTCGGAG--AGCTTCTGCTTG 2745 Query 270710 GTAAACCTCTTTACGGCCACGTGCACTCCCTTCCACCTACCTTCATATACTACTCCATAA 270769 | ||| |||||||||| |||| |||||| ||||| | | | || || | ||||| Sbjct 2744 ATGAACTTCTTTACGGCAACGTCCACTCCTTTCCATTTCGCCTTGTAGACGATGCCATAG 2685 Query 270770 CTGCCCTGACCAACCTGCTTACCTAGGTTAATCTCATCATAGTTTATAATCCAGCGACAG 270829 ||||| ||| | || || || | | || | | |||| || ||||| |||||| Sbjct 2684 CTGCCAACACCGATTTGAGGGCCGAGCTGCAGCTGCTTAAAGTTGATGATCCAACGACAG 2625 Query 270830 AGGTTAGCACTGGCCAAAAAGTCATCCTCCTT 270861 ||||| || |||| | ||| |||| ||||| Sbjct 2624 AGGTTGGCGCTGGTGAGGAAGGCATCTTCCTT 2593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884847639078265