Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq158 125 2e-26 >seq158 Length=73245 Score = 125 bits (138), Expect = 2e-26 Identities = 333/502 (66%), Gaps = 34/502 (7%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| |||||||||| ||||| ||| || ||||||||||| || Sbjct 38507 TACGGCCGCAAGGTTAAAACTCAAAGAAATTGGCGGAAGATCGTTTAAGCGGTGGAGTAT 38448 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG---ACATCCTCTG---- 113 |||||||||||||| ||||||| ||||||||||| ||| |||| || | Sbjct 38447 GTGGTTTAATTCGATAATACGCGAAAAACCTTACCAATCTTTGTGCACATTTTCGGTTCT 38388 Query 114 ---ACCCCTCTAG---AGATAGAGGTTTCCCCTTCGGGGGA-CAGAGTGACAGGTGATGC 166 | | | ||| | || || | || ||| | | ||| |||| | ||| Sbjct 38387 ACAAAACTTGTAGCCCAAATTGACCACCTCAATTTGGGCTAGCTATGTGCCAGGCGTTGC 38328 Query 167 ATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCC 226 |||| |||||| |||||||||| | ||||| |||||| ||| |||| ||||||||| Sbjct 38327 ATGGCTGTCGTAAGCTCGTGTCTTAGGATGTGTGGTTAACTCCATGAACGGGCGCAACCC 38268 Query 227 TTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGG 286 || | ||||| || | || || || | | ||||| ||| || Sbjct 38267 TTGTTCCTAGTT-AGATTAGGAA--TGAAAACAGT--GAAAACTGCTTTTGA------GG 38219 Query 287 AGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCT 346 | || ||| | ||||| ||| ||| || |||| ||||||||||||||| || Sbjct 38218 A------TGAGGAGTATGTCAAGTCAATATGACCTTTATAGATTGGGCTACACACGTACT 38165 Query 347 ACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTT 406 |||| || ||||| | | | | | ||| |||| || ||||| | ||| | Sbjct 38164 ACAACGGTAGCTACAATGAGAAACAATGCCGTGAGGCGGAGTAAATCTCTAAAACCTACC 38105 Query 407 CTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTA 466 || |||||||||| | | || || | |||||||| || ||| ||||||||||||| Sbjct 38104 CT-AGTTCGGATTATTTTTTGAAA--TAAAAATATGAAGTTGTAATTGCTAGTAATCGTA 38048 Query 467 GATCAGCATGCTACGGTGAATA 488 | || ||| | ||||||||| Sbjct 38047 AAAAAGAATGTTGCGGTGAATA 38026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503778927040