Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq14686 554 1e-155 seq13301 208 2e-51 seq81 138 3e-30 seq69 105 2e-20 seq13 87.8 5e-15 >seq14686 Length=12525 Score = 554 bits (614), Expect = 1e-155 Identities = 456/552 (83%), Gaps = 51/552 (9%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAA---AAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||||| | |||| ||||||| ||||||||||||||| Sbjct 5903 GTACTCATTCCAATTACAAGTCTTTTTGCAAGA--CCTGTATTGTTATTTATTGTCACTA 5960 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 5961 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGAAGTGGTAGCC 6020 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 6021 ATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTTACGACCATG 6080 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 6081 GTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAAGCATCGCCG 6140 Query 238 G---CTCAAGG---CCA---TGCGATTCGTTA-AGTTATTATGAATCACCAAGGAGCCCC 287 | | | ||| ||| ||||||||| || ||||||||||||||||| | | || Sbjct 6141 GTCCCACGAGGGGACCATGGTGCGATTCGATAGAGTTATTATGAATCACCGTTGGGTCCA 6200 Query 288 G------AAG------GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GA----- 329 | ||| || | |||||||||||||||||||||| ||||||| || Sbjct 6201 GGGCAGCAAGCCACCCTGCATCGGTTTTTTATCTAATAAATACATCCCTTCCAGAGAGCC 6260 Query 330 -----------AGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCA 378 ||||||| ||| ||||||||||||||||||||||| ||||||||||| Sbjct 6261 TTGCGACCCCCAGTCGGGACTTTGGGCATGTATTAGCTCTAGAATTACTACGGTTATCCA 6320 Query 379 TGTAGT------AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGT 432 ||||| |||| || ||||||||||| ||||||||||||||||||||| |||||| Sbjct 6321 AGTAGTAAAATAAAGGAACCATCAAATAAACTATAACTGATTTAATGAGCCATCCGCAGT 6380 Query 433 TTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 || | ||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6381 CTCGCCGTATA-AAAGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 6439 Query 493 GACTACTGGCAG 504 |||||||||||| Sbjct 6440 GACTACTGGCAG 6451 >seq13301 Length=527 Score = 208 bits (230), Expect = 2e-51 Identities = 145/164 (88%), Gaps = 8/164 (5%) Strand=Plus/Plus Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA-------GGTACTATCAAATA 400 ||||||||||||||||||| ||||||||||| ||||||| || || | |||||| Sbjct 1 GTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAAAATAAAGGAACCAGCAAATA 60 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| ||||||||||||||||||||| |||||| || | ||||||| ||||||||||||| Sbjct 61 AACTATAACTGATTTAATGAGCCATCCGCAGTCTCGCCGTATAGAA-GCTTATACTTAGA 119 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 163 >seq81 Length=84896 Score = 138 bits (152), Expect = 3e-30 Identities = 89/96 (93%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||||||||||||||||| |||||| || | ||||| | ||||||||||||||||||||| Sbjct 84896 CTGATTTAATGAGCCATCCGCAGTCTCGCCGTATAAAA-GCTTATACTTAGACATGCATG 84838 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||| Sbjct 84837 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 84802 >seq69 Length=118787 Score = 105 bits (116), Expect = 2e-20 Identities = 88/105 (84%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 ||||| ||||||||||||||||||||| |||| |||||||||| | ||||| |||| Sbjct 3337 TAAACTATAACTGATTTAATGAGCCATCTTCAGTCTCACTGTATA-AAAGCTTAAGCTTA 3395 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 |||| |||| |||||||||||||| ||| ||| |||||||||| Sbjct 3396 AACATACATGACTTAATCTTTGAGA-AAGGGTATAACTACTGGCA 3439 >seq13 Length=197486 Score = 87.8 bits (96), Expect = 5e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 130 CCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTAT 189 ||||||| | |||| ||||| ||||| | ||||||||| |||||||||||| |||| Sbjct 23387 CCCTCTCTGTAATCAAACCCAAATTCTC--TTACCCGTTACAACCATGGTAGGCAGCTAT 23330 Query 190 CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 | |||| | ||||||||| || || ||||||||| || |||| || || Sbjct 23329 CTAACCACCAAAAGTTGATTGGCCAAAAATTTGAACAAAGCATCACCAGC 23280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510177986304