Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 291 6e-74 seq14654 255 5e-63 seq182 192 5e-44 >seq3 Length=147229 Score = 291 bits (322), Expect = 6e-74 Identities = 801/1218 (66%), Gaps = 12/1218 (1%) Strand=Plus/Plus Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTC 65782 || || || || ||||||||||| || || ||| || || ||| ||||| | |||| Sbjct 143189 AGCGCAGCGAAGTAAATGGTCTCAAAGATATCTCGGTTGAGGTCAGCAGCCTCTTGGCTC 143248 Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842 || | || | || ||||| | ||| ||| || || ||||| || ||||| |||||| Sbjct 143249 TCCCAGGGGAAACGCATCATCAAAAAGACGTCCGCAAGGCCTTGCACACCAATTCCGATG 143308 Query 65843 GGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATA 65902 ||||||||||| | || || | ||||| || || ||||| |||| || || Sbjct 143309 GGACGATGACGAAGGTTCGAGTTGCGAGCCTCGACAACGGGATAGTAGTTGACGTCAATG 143368 Query 65903 ATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAA 65960 | || | ||||| || || || | || | | ||| ||| | | |||| Sbjct 143369 ACCTTGTTGAGGTTGCGAGTGACGACCTTAACCA--CCTCGAACAAACGGCTGTGGTCAA 143426 Query 65961 AATGTT-TAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019 | | | || || | | | | || ||||||||||||||| || ||||| ||| Sbjct 143427 ATCGGGCTCGGCCGCT-GTCTGCGTCGATGGACACAAACTTGGGAAGAGCGAGAGAAGCG 143485 Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079 |||||||| ||||| | ||||| | ||| ||||| | || || ||||| || || Sbjct 143486 AGGTTGCACACAGCCACTTCGTCCTTGGAGGTGTACTCCATGATCTCCGTGCAAAGGTTG 143545 Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTAC 66139 || | || |||||||| | |||||||| || |||||| ||||| | |||||||| Sbjct 143546 CTTGAACGAATGGTGCCGAGGTTCTGTTGGTTGGACTTGCGGTTGCACGAGTCCTTGTAT 143605 Query 66140 ATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGT 66199 | ||| || || ||||||||||| | ||| ||| | ||||||| ||| || | | Sbjct 143606 AGCATATAGGGCGTGCCGGTCTCTATCTGGCTCTCCAGGATGGCGAACCAGAGCTCTTGG 143665 Query 66200 GCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAG 66259 ||||| || | | || | || | ||||||| | |||||| || || Sbjct 143666 GCCTTAACGCTCCTCCTGGCTCGGCCCTCCTGTTCGTATCGAGTGTAGAGCGCCTCAAAC 143725 Query 66260 GATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCA 66319 || ||||| || || | || | ||| | || ||||| | ||| ||||| || Sbjct 143726 TCCTCTCCCCAGACATCAGCCAAGCCGGGAGCTTCGTTGGGACAAAACAGGGACCACTCC 143785 Query 66320 CCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGAT 66377 || || ||| || || ||| ||||| || || | |||||| ||||| ||||| | Sbjct 143786 TGAT--TGCTCTCCACTCGCTTCATGAATAGGTCCGGAACCCAGAGCGCGTAAAAGAGGT 143843 Query 66378 CGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGT 66437 | | || || ||||||| ||||||| || || || || || ||||| || | || Sbjct 143844 CTCTGGCGCGCAGCTCCTCCTTGCCGTGGTTCTTCTTCAGCTCCAGAAACTCGAAAACGT 143903 Query 66438 CGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGT 66497 | || |||||||| |||| ||||| || || | || | |||||||| || ||||||| Sbjct 143904 CCGCGTGCCATGGCTCCAAGTAGACAGCAAAAGCTCCTTTGCGTTTGCCTCCTCCTTGGT 143963 Query 66498 CGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGC 66557 ||||||| | || | ||| ||||| || | |||||| | ||| ||||| || ||| Sbjct 143964 CGACGTATCTGGCAGTGTCGTTAAAGACGCGAAGCATCGGGATGAGACCGTTCGACGTGC 144023 Query 66558 CATTGGTGCCGTCGATGGGGGATCCTCG-TGCCCGTATATCGTGAACATTCAGACCAATA 66616 |||| || || ||| | | | || || || || ||| || | || || || Sbjct 144024 CATTAGTTCCACGGAT-GTAGCTGTGCGAGGCACGGATTGTGTGTACGCTGAGGCCGATG 144082 Query 66617 CCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATG 66676 ||||| || | ||| ||||| || || | | || | | ||||| || ||| Sbjct 144083 CCACCAGCGGCCTTGGAGATCAAGGCGCATTGCTTTAGGGTGTCGTAGATGCCCTCGATG 144142 Query 66677 GAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCC 66736 ||| || | || || || | |||| ||| ||||| || |||| |||| Sbjct 144143 CTGTCCTCCCTCATCGTGAGCAAAAAGCAGGAAGAGAGTTGCGGCCGCTCTGTGCCGGCG 144202 Query 66737 GAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCG 66796 |||||| ||||| || ||||| |||||||| || |||||| |||||| ||||| Sbjct 144203 TTGAAGAGAGTGGGGGTGGCGTGAGTAAAGTAGAGGTTGGACATGAGATTGTAGGTCTCA 144262 Query 66797 ATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGA 66856 ||| ||||| |||||| | | ||| || |||| ||| |||||| | | || |||| Sbjct 144263 ATGGCAGCAGCAATGTCTCCCATATGGATGCCGATGGCAACTCGCATGATCATGTGTTGA 144322 Query 66857 GGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATA 66916 |||| || || | | ||| | | | | |||| | |||| |||||| | Sbjct 144323 GGCCTCTCAACGATCTTGCCCTCCACCTTGAAGAGGTAGCTCCTCTCCAAGGTCTTAAAG 144382 Query 66917 CCAAAGTACGAGTAATTG 66934 |||||||| ||||||||| Sbjct 144383 CCAAAGTAAGAGTAATTG 144400 >seq14654 Length=53260 Score = 255 bits (282), Expect = 5e-63 Identities = 569/841 (68%), Gaps = 20/841 (2%) Strand=Plus/Minus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| ||||| || || ||||||||| | |||||||| || | || |||| Sbjct 48728 ATGTACAAGAAGGCCGAGGCCAGCTTCTGGACCGCCGAGGAGGTGGACCTTGCCCAAGAT 48669 Query 61156 ATGAATGACTGGGAGCGTTTATC-GAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 | | |||||| || | || ||| | || | |||| || | || || |||| Sbjct 48668 CTCACCGACTGGAAGAAGCTCTCTGAG-GACGAGCGCTATTTTATCACCCACGTCCTGGC 48610 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||||||||| |||||||| ||||| ||||| || | || ||| | |||| Sbjct 48609 CTTCTTTGCCGCCTCGGACGGAATCGTTGTGGAGAACTTGGCCGTCCGCTTCATGAAGGA 48550 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 ||||||||| | ||||| || || ||||||||||| ||||| ||||| |||||| |||| Sbjct 48549 GGTGCAAGTACCCGAGGCTCGCTGCTTCTACGGCTTTCAGATCGCCATTGAGAATATCCA 48490 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 ||||||||||||| | || ||||| || ||| | | ||| | ||| || || Sbjct 48489 CTCGGAGATGTACTCCCTCCTGATCGACACCTACGTGAAGGACCCCTTGGAGAAGGACCG 48430 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGT--GAAGCGGAAAGCGGATTGGGCCTTC 61452 | ||||| ||||||||||| | || | || ||| |||||| || |||||| || Sbjct 48429 CCTCTTCAACGCCATCGAGACCGTGCCTACCGTCCGAA--AGAAAGCTGAGTGGGCCATC 48372 Query 61453 AATTGGAT-CACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGT 61511 || ||||| | | | ||||| |||| | | || | |||| || || | || Sbjct 48371 AAGTGGATAGAAAACCCCGACGGC----TTTGCTCACCGGCTCGTGGCCTTCGCTGCTGT 48316 Query 61512 CGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACT 61571 ||||| | |||||| ||| || ||| ||| ||||||||||||||||| | || || Sbjct 48315 GGAGGGCATCTTTTTCTCTGGTTCCTTTTGCGCCATCTTTTGGTTGAAGAAGAGAGGCCT 48256 Query 61572 TATGCCCGGTCTGACCTTCAGCAATGAGTTGAT-ATCACGCGACGAGGGCATGCATTGTG 61630 |||||| || || ||||| |||||| ||| | || | |||||||||||||| |||| Sbjct 48255 TATGCCTGGACTTTGTTTCAGTAATGAGCAGATCAGCA-GGGACGAGGGCATGCACTGTG 48197 Query 61631 ATTTTGCTGTTTTGCTATTCAAACGCTAT-CTGGTGAATCGTCCGTCGGAGGAGCGTG-T 61688 | ||||| | || | ||| ||| | ||| | || || | || |||| Sbjct 48196 ACTTTGCCTGCCTCCTCTACAA----TATGATCCAGAACAGACCCTCCAACGA-CGTGCC 48142 Query 61689 GGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCC 61748 ||||| | |||||| || || ||| |||| ||| ||| || | | || Sbjct 48141 CACCAAGATTATCGCTGAGGCAGTGGAGATTGAAAAGGAGTTTGTGAGCGAGTCCCTTCC 48082 Query 61749 CGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGA 61808 || |||||||||||||| | || |||| ||||| ||||| ||||| || || Sbjct 48081 AGTGAGGCTCATCGGCATGAACGCCGAGCTCATGTGCCAGTACATTGAGTTTGTGGCGGA 48022 Query 61809 CCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTT 61868 ||| ||| |||| | | || || |||||| || | | ||||| ||||| | Sbjct 48021 CCGCCTGCTGGTGGCCCTCGGCTGCGAGAAGATCTACAACGCTACGAACCCGTTTGACTG 47962 Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928 ||||| | || || |||| |||||||| || |||||||||| || || || || || Sbjct 47961 GATGGAGCTCATCTCCTTGGAAGGCAAGACCAACTTTTTCGAGAGGCGCGTGGGAGAGTA 47902 Query 61929 T 61929 | Sbjct 47901 T 47901 >seq182 Length=84632 Score = 192 bits (212), Expect = 5e-44 Identities = 497/745 (67%), Gaps = 27/745 (4%) Strand=Plus/Plus Query 61088 TTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGT 61147 ||||| |||||||| ||||| | ||| ||| ||||||||||||||||| || || Sbjct 21758 TTTGGGAAATGTACAAGAAGGCCCAGGCTAGCTTTTGGACGGTGGAGGAGGTAGACCTGG 21817 Query 61148 CCAAAGACATGAATGACTGGGAGC-----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 | ||| | | |||||| ||| | || | ||| | |||| || || || || Sbjct 21818 TGCAGGACCTTACCGACTGG-AGCCACAAGCTTGTGGAG-GACGAACGCCACTTTATCAA 21875 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || |||||||| || || || || ||||| || ||||| ||||| | | || Sbjct 21876 GCACGTGTTGGCCTTTTTCGCTGCCTCGGATGGCATCGTGGTGGAGAACCTTGCTGCCCG 21935 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| | |||| || ||| || ||||||| ||||| ||||||||||| || || ||||| Sbjct 21936 CTTCATGAAGGAAGTTCAACTGCCGGAGGCACGTTGCTTCTACGGCTTTCAAATCGCCAT 21995 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||||||||||||| | |||||||| || ||| ||| || || Sbjct 21996 GGAGAACATCCACTCGGAGATGTACTCGCTGCTCATCGACACCTACGTCAAAGA-CG--- 22051 Query 61383 GGAACGTGAACGAT----TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438 ||| | || | | | || || ||||| |||||| | || |||||| ||| | Sbjct 22052 TGAAAGAAAAGGCTAAGCTCTTTAACGCCATTGAGACGGTGCCTAGCGTGAAGAAGAAGG 22111 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTA-CATTTGGTGAACGATTGCTG 61497 | || ||||| | |||||| || | | | | | | |||| | || | | Sbjct 22112 CCGAATGGGCGCTGCGTTGGAT----AGAAAAGCCACAAGCTTTTGCTCTGCGGCTCATT 22167 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | || || || | || ||| || || || ||| ||||| ||| || Sbjct 22168 GCCTTTGCCGCAGTGGAAGGCATCTTCTTCTCGGGCTCCTTCTGCGCCATCTTCTGGCTG 22227 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 |||||| | || || ||||| || || | ||||||||| ||| | ||| | || || Sbjct 22228 AAGAAAAGAGGGCTGATGCCTGGGCTCAGCTTCAGCAACGAGCTCATAAGCAGGGATGAA 22287 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTC-AAACGCTATCTGGTGAATCGTCCGTC 61676 |||||||||||||| |||||| | |||| ||| | | || || || ||| | Sbjct 22288 GGCATGCATTGTGACTTTGCTTGTATGCTGTTCGGCATGTTA-AGGGACAA---ACCGCC 22343 Query 61677 GGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 |||||| | || ||| || || || || ||||| |||| ||| | | Sbjct 22344 CGAGGAGATCATCCGTCGGATCATTGCGGAAGCTGTTGACATCGAGAAGGAGTTTGTTTC 22403 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTG 61795 || || | || || ||||||||||||||| || ||| || |||| |||||||| | Sbjct 22404 CGAGTCTCTTCCTGTTCGACTCATCGGCATGAA-TGCGGAGCTCATGTGCCAGTATATAG 22462 Query 61796 AATTTGTTGCCGACCGTCTGTTGGT 61820 | ||||| || || || || |||| Sbjct 22463 AGTTTGTGGCGGATCGGCTTATGGT 22487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397496778053360