Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq128 127 8e-24 seq14 87.8 7e-12 seq235 84.2 8e-11 >seq128 Length=25026 Score = 127 bits (140), Expect = 8e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 272063 TGCAGGAAATGCATGCCCTTGGCTGCTTGGTAGGCAATCTTGGCCTTGAGGATAAAAGGG 272122 || |||||||| | ||| |||| || || || ||||| | || | ||| || Sbjct 6194 TGAAGGAAATGTAAGCCTCTGGCGGCCTGCAGCGCCATCTTCACTTTCTTGGCAAACGGA 6253 Query 272123 ATCTCAGCAATGAGCTCATTGTGCAGCAGGTCGTACAGAGAACCCAGAGACATAAACTCC 272182 || ||| ||||||||| ||||| || | |||||||||||||| || ||| ||||| Sbjct 6254 ATGACAGGAATGAGCTCGTTGTGTAGAACATCGTACAGAGAACCGAGTTGCATGTACTCC 6313 Query 272183 ATCACAATGCACATCTTGGGAGGCTTGGTGCAAGCAGCCATGAAGAGAACCACGTTAGGA 272242 ||||| |||||||| || || |||| |||||||| |||||||| || |||||||| ||| Sbjct 6314 ATCACTATGCACATGTTCGGTGGCTGAGTGCAAGCCGCCATGAATAGCACCACGTTTGGA 6373 Query 272243 TGTCTAAGGGCGGTCATGAC 272262 || | ||| | ||||| || Sbjct 6374 TGACGAAGCTCTGTCATTAC 6393 Score = 86.0 bits (94), Expect = 2e-11 Identities = 167/245 (68%), Gaps = 10/245 (4%) Strand=Plus/Plus Query 270619 AATAATGTTGGGATGTTGTAGTTGGGGTTGAGAGAGGAAAGCGACTTCTGCTCTAAACTC 270678 || |||||||||||| || || | | ||||||||| | ||| || | ||||| Sbjct 4167 AACAATGTTGGGATGGTGAAGCTCGCT------GAGGAAAGCCATTTCAGCACGGAACTC 4220 Query 270679 GAGCAT--GTTTCTCTCATCCATCTTTTGCTTTGTAAACCTCTTTACGGCCACGTGCACT 270736 | ||| ||||||| | | ||| ||||| | ||| |||||||||| |||| |||| Sbjct 4221 CAACATTCGTTTCTCGGAG--AGCTTCTGCTTGATGAACTTCTTTACGGCAACGTCCACT 4278 Query 270737 CCCTTCCACCTACCTTCATATACTACTCCATAACTGCCCTGACCAACCTGCTTACCTAGG 270796 || ||||| | | | || || | |||||| ||||| ||| | || || || Sbjct 4279 CCTTTCCATTTCGCCTTGTAGACGATTCCATAGCTGCCAACACCGATTTGAGGGCCGAGC 4338 Query 270797 TTAATCTCATCATAGTTTATAATCCAGCGACAGAGGTTAGCACTGGCCAAAAAGTCATCC 270856 | | || | | |||| || ||||| ||||||||||| || |||| | ||| |||| Sbjct 4339 TGCAGCTGCTTAAAGTTGATGATCCAACGACAGAGGTTGGCGCTGGTGAGGAAGGCATCT 4398 Query 270857 TCCTT 270861 ||||| Sbjct 4399 TCCTT 4403 >seq14 Length=131322 Score = 87.8 bits (96), Expect = 7e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 354431 CCCATTTCAGAACCTCCAAATGGCCTTTCATCGCGGCTCCTTCACAAGTCTCAGAACTCC 354490 |||||||||| || |||||||| |||||| || |||| ||| || || | ||||| Sbjct 78140 CCCATTTCAGCACTTCCAAATGACCTTTCGCTGCAGCTCGTTCGCAGGTTTTCTCACTCC 78199 Query 354491 AAGGACAATCATGTTCCCTCAGCCACTGCAGAACCTCTAGATGACCACCTTGGGCAGC 354548 ||||||| || | ||||| ||||| |||| ||||| ||||| || || || ||||| Sbjct 78200 AAGGACATTCGTTCTCCCTGAGCCATTGCAACACCTCCAGATGGCCTCCCTGAGCAGC 78257 >seq235 Length=40512 Score = 84.2 bits (92), Expect = 8e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 159457 CTGGTAAGGACCGTAGACATTGTTACAACGGGTGATGATTACGGGAAGAGAGAAGGAGAG 159516 ||||| |||||||||||||||||| | ||||| ||||| | ||||| || ||| | Sbjct 15360 CTGGTGAGGACCGTAGACATTGTTGCTGCGGGTTATGATGATAGGAAGTTGAAAAGAGCG 15301 Query 159517 ACGATAAGAACTGGCCAAGAGTTCTGCTCCTGCCTTGCTGGCCGCATAAGGGTTAGTGGG 159576 | | ||||| || | | || || || |||| |||||||| ||||||||||| || || Sbjct 15300 ATGGTAAGACTTGACAACAAGCTCAGCGGCTGCTTTGCTGGCAGCATAAGGGTTGGTTGG 15241 Query 159577 C 159577 | Sbjct 15240 C 15240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884531417577207