Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq6 149 2e-33 >seq6 Length=61224 Score = 149 bits (164), Expect = 2e-33 Identities = 197/270 (73%), Gaps = 15/270 (6%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGA---GTCTCGGGTGGAGACAGCGCCGCCATC 69 |||||||||| | | |||||||||| || | || ||||||||| | | || Sbjct 662 GCATCTTCACGGAAAGTTCAATTTCATCGAAGTGATTC---TGGAGACAGTGGGGAGGTC 718 Query 70 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 129 ||||| |||||| ||| |||| || |||| ||||||||||||||||||||||||||||| Sbjct 719 GTTACACCATTCATGCGCGTCGAAAATTACTCGACAAGGAATTTCGCTACCTTAGGACCG 778 Query 130 TTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCC 189 | || ||||| |||||||||||| | |||| || | | ||| || || | || | Sbjct 779 TCATAGTTACAGCCGCCGTTTACTCAGACTTCAATTCAAACCTT-GC---AGTTCTCCTC 834 Query 190 ATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTG 249 || ||| |||||||||||| || ||||||||| || || | |||| Sbjct 835 -----TTCCTCTTGGAGCACCGGGCAGGTCGCAGACCCTATACATCATGTTGCCATTTTG 889 Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 |||| | ||||||||||| ||||||||||| Sbjct 890 CAGAATCCTGTGTTTTTATTAAACAGTCGC 919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260777658624