Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 2e-13 >seq6 Length=61224 Score = 82.4 bits (90), Expect = 2e-13 Identities = 215/316 (68%), Gaps = 28/316 (9%) Strand=Plus/Plus Query 96 TAGATCGCCCGGTTTTCGGGTCTATT---TCCCAGCGACTAGACGCCCTAGTAAGACTCG 152 ||||||||| ||||| |||||||| | | | ||||| ||||| ||||| || Sbjct 1953 TAGATCGCCTGGTTT-CGGGTCTAATAAATGTAACTCTTTAGACACCCTATTAAGATACG 2011 Query 153 CTTTTCGCTACGCCTCCCCTATTCGG-TTAAGCTTTGCCACTGAA--AATAAGTCGCTGA 209 |||| |||||||||| | | || |||||||| || || || | ||| ||||||| Sbjct 2012 CTTT-CGCTACGCCTACAGTTATCACCTTAAGCTT-GCTAC-GATTTATTAACTCGCTGA 2068 Query 210 CCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGT-ACGCA 268 |||||||||||||||||||| || || | ||| |||||| | | | Sbjct 2069 CCCATTATACAAAAGGTACGTTGT--------AACTTTATTTCCAACTGCTCATCATGTT 2120 Query 269 TACGGTTTCAGGATCTATTTCACTCC------CCTCTCCGGGGT-TCTTTTCGCCTTTCC 321 ||| ||||| | ||||||||||| | | || | |||||| |||||| Sbjct 2121 TACAATTTCACGGTCTATTTCACTTCATAGATATTTTCTATAATCACTTTTCATCTTTCC 2180 Query 322 CTCACGGTACTAGTTCACTATCGGTC-AGTCAGTAGTATTTAGCCTTGGAGGATGGTCCC 380 |||| ||||| |||||||||| ||| | | || | ||| | | || | || ||| ||| Sbjct 2181 TTCACAGTACTTGTTCACTATCAGTCAAATAAGCA-TATGTTGAGTTTGGGGGTGGACCC 2239 Query 381 CCCATATTCAGACAAA 396 || |||||| ||||| Sbjct 2240 CCATTATTCAAACAAA 2255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241577998848