Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq6 201 3e-49 >seq6 Length=61224 Score = 201 bits (222), Expect = 3e-49 Identities = 245/330 (74%), Gaps = 8/330 (2%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| |||||||| ||||| ||||||||||| | ||| |||| | ||||| Sbjct 53042 ATTAGGTAGTTGGTGGGGTAAAGGCTTACCAAGCCAGAGATTCGTAGGTGGTTCGAGAGA 52983 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| ||||||||| | ||| | | | |||||||| || | |||| ||||| || Sbjct 52982 ATGATCATCCACATTGGTATTGAAATAAAGACCAAACTCTTATG--AGGCTGCAGTAAGG 52925 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 ||||||| |||||| || |||| |||| |||| || | | ||||| || || | | Sbjct 52924 AATATTGGACAATGAGCGCAAGCTTGATCCAGCTACACTGAGTGAGGGAAGACG----TA 52869 Query 348 GGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGC 407 | |||||| |||| | |||||||| |||||| | || | || |||| |||||| Sbjct 52868 AAG-CGTAAACCTCTTTTGATAAGGAAGAAAATGACAAAAATTAAAGAAGAAGTCCCGGC 52810 Query 408 TAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGG 467 ||| | ||||||||| |||||||||||||| ||||||| ||| |||| || || | | | Sbjct 52809 TAATTTCGTGCCAGCCGCCGCGGTAATACGGAGGGGGCAAGCATTATTCGTAAGGA-TTG 52751 Query 468 GGCGTAAAGGGTGCGTAGGTGGTTTCTTAA 497 ||||||||||||||||||| || |||| || Sbjct 52750 GGCGTAAAGGGTGCGTAGGCGGGTTCTAAA 52721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497573462528