Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq79 172 1e-40 >seq79 Length=50410 Score = 172 bits (190), Expect = 1e-40 Identities = 194/258 (75%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| | || |||||| | |||||| |||||||||||||||||||| Sbjct 15070 CTTCTTAGAGGGACTACCTGCCTCAAGCAGGCGGAAGTCCGAGGCAATAACAGGTCTGTG 15011 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||| |||||||||||||||||||| || || ||| || | Sbjct 15010 ATGCCCTTAGATACCTTGGGCCGCACGCGCGCTACAATGTAGGAAACAAAAAG----GCT 14955 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| | |||||||| ||||||||| | | || || ||| ||| | || | ||| Sbjct 14954 CCTGGTCCGGAAGGATTGGGTAATCATTTGAATTTCCTACGTAACTGGGCTTGATCTTTG 14895 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| || | |||||||||| ||| ||||||| ||||| | | | ||| | Sbjct 14894 TAATTATTGATCATAAACGAGGAATTCCTTGTAAGCGTAAGTCATTACCTTATGCTGAAT 14835 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 14834 ATGTCCCTGCCCTTTGTA 14817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947183215616