Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq319 176 4e-39 >seq319 Length=25483 Score = 176 bits (194), Expect = 4e-39 Identities = 625/960 (65%), Gaps = 29/960 (3%) Strand=Plus/Minus Query 65996 AACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATAC 66055 || || ||||| || | ||| ||||| || || || || || || || || | ||||| Sbjct 7515 AATTTTGGAAGTGCGATAGAGGCGAGATTACAAACGGCAATTTCATCTGGTGATGTATAT 7456 Query 66056 TCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTC 66115 | | ||||| || || |||||||| | | ||||| || ||||||| |||||| Sbjct 7455 TGAATGATTTCTGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTGGAT 7396 Query 66116 TTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCA 66175 ||| |||||| |||||||| |||| ||| | || || || || |||||||| || || Sbjct 7395 TTGGCATTGCAAGCATCCTTATACAAGATGAATGGTGTACCAGTTTCAACTTGAGATTCC 7336 Query 66176 ATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTT---TGCGT 66232 || |||||| ||||||| | | || || | ||||| | ||| || | Sbjct 7335 ATAATGGCGAACCAAAGATCTTGAGCTTTAATTATACGTCTTGGTAGGCCTGGTGTGGCT 7276 Query 66233 TCGTAATGTTCGTAGAGGTGTTCGAAGGA-TTCACCCCATACTTCGGACAGACATGGACA 66291 || || | |||||| | ||| | |||| ||| | |||| ||| Sbjct 7275 TCATATTTCAAGTAGAGA-GCACGATGTTGTTCAGAGTGAGTTTCAGCAAGACCTGGTGC 7217 Query 66292 CTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATC 66351 | || |||||| | || | ||||||||||| ||||| ||||| |||||| | ||| Sbjct 7216 TTCGTTTGGACAAAAGAGAGCCCAATCACCATTTTGTTCGACACGCTCCATAAAGATATC 7157 Query 66352 AGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTT 66410 | | ||| ||||| ||||| || || | |||| |||||| | || ||| |||| Sbjct 7156 ACTGACCCAAAGGGCATAGAAAAGGTCTCTAGCTCTCATCTCCTCTTTACCAGTG-TTTT 7098 Query 66411 TGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACG 66470 | | || | ||| ||||||| ||||| |||||||| |||| ||| | ||| || | Sbjct 7097 TCTTGAGATCAATGAATTCAAAGACATCGGCGTGCCATGGCTCCAAGTAAACGGCAAAGG 7038 Query 66471 AGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCA 66530 || | | ||||| |||||||| |||||||| ||||| || ||||| ||||| | Sbjct 7037 CACCTTTTCTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACACGAA 6978 Query 66531 ACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCG---TG 66587 ||| ||||| | || || | |||||||| || ||| | | | | | Sbjct 6977 GCATTGGTACCAAACCATTGCTAGTACCATTGGTACC-ACGA--ATATAACTTTGAGCAG 6921 Query 66588 CCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAAT 66647 | || || | ||||| | |||||||||||| || |||| |||||| || || | Sbjct 6920 CACGAATTTTATGAACGGCAATACCAATACCACCAGCACTCTTTGAGATGAGTGCGCATT 6861 Query 66648 CGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATG 66707 || || | | || || || || || || | || || | | | | || | Sbjct 6860 GTTTCAAGGTATCGTAGATACCATCGATTGAATCCTCTTTCATTTGAACTAAGAAACAAG 6801 Query 66708 AACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGT 66767 || | ||| ||| ||||| | || ||| | ||| ||||| || || || || | Sbjct 6800 AAGACATTTGTGGTGATGGTGTACCTGCATTGAATAAGGTTGGTGTGGCATGAGTGAA-T 6742 Query 66768 AATGGC---GAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAA 66824 ||| | || | | || ||||| || | ||| ||| |||||||| ||||||||| | Sbjct 6741 AATTTCTCTGATAAACGT--TTGTATGTGTTGATAGCAGAATCAATGTCTTCGCCATGGA 6684 Query 66825 TCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTG 66880 | || | || | ||||||| | || ||| || |||||||| | ||| | | Sbjct 6683 TACCAATTGAAACACGCATCAACATGTGTTGTGGACGTTCGACGATTTTGCC-ACC---A 6628 Query 66881 ATATGCATTAAG-TAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||| | || ||| ||||| ||||||| || |||| |||||| | |||| |||||| Sbjct 6627 ATACG-ATGAAGATAGGAACGTTCCAATGTTTTGAATCCAAAGAAATCATAATCGAAATC 6569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559414022080