Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq445 118 1e-24 seq446 111 2e-22 >seq445 Length=5314 Score = 118 bits (130), Expect = 1e-24 Identities = 148/199 (74%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||| || || || Sbjct 3295 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGGGCAGACAAAC 3236 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||| | ||||| | | |||| || | || |||| ||| || ||||| || Sbjct 3235 CTCGTTCTTTCAACTTAGCATATATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 3176 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGC-GCATT 179 |||||| | |||||||| |||||| ||||||||| | | | | | || | ||||| Sbjct 3175 TCTCGGACTTGGACCTTAGCACCCAAGCCCTCACT-GTTAGTGAACA-TTATACAGCATT 3118 Query 180 CGGAGTTTGGCAGGACTTG 198 ||||||||| ||||| ||| Sbjct 3117 CGGAGTTTGTCAGGAATTG 3099 >seq446 Length=116643 Score = 111 bits (122), Expect = 2e-22 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||| ||||| || Sbjct 3510 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTATGCAATCGCAC 3451 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||||| | ||||| | | || || | || |||| ||| || ||||| || Sbjct 3450 CTCGTTAGTTCAACTTAGTAGTAACTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 3391 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| | ||||||| ||||| | ||||||| || | || | | | |||||| Sbjct 3390 TCTCGGCCCGTGACCTTAGCACCCCGGGCCTCACT-GCTGAGTAT-ATTATTTAGCATTC 3333 Query 181 GGAGTTTGGCAGGACTTG 198 |||||||| | ||| ||| Sbjct 3332 GGAGTTTGTCTGGATTTG 3315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537530306544