Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq446 132 9e-29 seq445 86.0 1e-14 seq3111 73.4 8e-11 >seq446 Length=116643 Score = 132 bits (146), Expect = 9e-29 Identities = 150/197 (76%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 129 CTACACTCTTTAACCGGCTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACG 188 ||||| ||||||| |||||||||||| ||||| ||||||| || ||||||||| Sbjct 3890 CTACAGCCTTTAACGATCTATTCCGTCAGATCGCGGCAGTGTCACTACTCCGTCCCCACA 3831 Query 189 TCACCCTCAAATGTAGTAACGGAATACTAACCGTTTCTGCCATCGG-TCTCGCCGTTCGG 247 || | | | | |||| |||||| ||||| || | |||||| | || || ||||| Sbjct 3830 TCGCAGTTATAAAAAGTACTGGAATATTAACCAGTTGT-CCATCGAATATC-CCTTTCGG 3773 Query 248 CTGAACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCT 307 | ||||| | ||||||| |||||||||||||||||| |||||||||||||||| || Sbjct 3772 GTTCTCCTTAGGTCCCGACTAACCCTGATCCGATTAGCGTTGATCAGGAAACCTTATCCT 3713 Query 308 TTCGGCGAGGGGGTTTC 324 ||||| | | |||||| Sbjct 3712 TTCGGTGGGCAGGTTTC 3696 >seq445 Length=5314 Score = 86.0 bits (94), Expect = 1e-14 Identities = 139/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 136 CTTTAACCGGCTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACGTCACCCT 195 ||||||| |||||||||||| |||||| | ||| || |||| || | |||| | Sbjct 3671 CTTTAACGAACTATTCCGTCAGTTCGCGGCGCTTTCATCACTCCGTCACCCCATCACAGT 3612 Query 196 CAAATGTAGTAACGGAATACTAACCGTTTCTGCCATCGG-TCTCGCCGTTCGGCTGAACC 254 | | | |||| |||||| ||||| || ||||||| | || || ||||| | || Sbjct 3611 AATAAGCAGTACGGGAATATTAACCCGTTG-GCCATCGACTGTC-CCTTTCGGGTTCGCC 3554 Query 255 TTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCG 314 ||| | || |||| |||| | | ||||||| | | |||||||||||| |||||| | Sbjct 3553 TTAGGTCCAGACTAACCCACAGCTGATTAGCATAGCTGTGGAAACCTTAGTTTTTCGGTG 3494 Query 315 AGGGGGTTTCCCACCC 330 | ||||||| | ||| Sbjct 3493 TGCGGGTTTCTCGCCC 3478 >seq3111 Length=1418 Score = 73.4 bits (80), Expect = 8e-11 Identities = 95/130 (73%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 203 AGTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACC 262 |||| |||||| ||||| || | |||||| ||| ||| || ||||| | | Sbjct 992 AGTACAGGAATATTAACCTGTTTT-CCATCGACTACGCTTTTCAGCCTCGCCTTAGGGAC 934 Query 263 CGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTT 322 ||||| |||||| |||||| || || ||||||||||| ||||||||||| ||| ||| Sbjct 933 CGACTAACCCTGCGTCGATTAACGTTGCGCAGGAAACCTTGGTCTTTCGGCGTGGGTGTT 874 Query 323 TCCCACCCCC 332 | ||| ||| Sbjct 873 TTTCACACCC 864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 959871532800