Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq446 336 4e-90 seq445 289 6e-76 seq1328 205 2e-50 seq3111 187 5e-45 seq2213 109 1e-21 >seq446 Length=116643 Score = 336 bits (372), Expect = 4e-90 Identities = 275/333 (83%), Gaps = 1/333 (0%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| |||||| |||||||||| |||||| | | | || |||||||||||||||| Sbjct 2897 CCCGAACAGGGGAGTGAAATAGAACCTGAAACTGTGTGCTTACAAGCGGTCGGAGCGTCC 2956 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | | |||||||||||||||||||||||||||||||||||||| || || | || || Sbjct 2957 AGGTGGCGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTACTCTTCTCTGGCAAG 3016 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 |||||| | || || | || | |||||| ||||||||| || || |||||| ||| Sbjct 3017 GTTAAGTGTTTAAGACACGG-ATCCGAAGCGAAAGCGAGTCTGAATAGGGCGTATAGTCA 3075 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 | || | ||||||||||||||||||||||||||| | |||||||||| |||||||| | Sbjct 3076 GGGGAGGTAGACGCGAAACCTTGTGATCTACCCATGGACAGGTTGAAGGTGCGGTAACAC 3135 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 || ||||||||||||||| ||||||||||||||||| ||||||| | |||||||||| Sbjct 3136 GTACTGGAGGACCGAACCGATAAACGTTGAAAAGTTTCCGGATGATCTGTGGGTAGGGGT 3195 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 336 ||||||| ||||||||||||||||||||||||| Sbjct 3196 GAAAGGCTAATCAAACTGGGAAATAGCTCGTAC 3228 >seq445 Length=5314 Score = 289 bits (320), Expect = 6e-76 Identities = 261/324 (81%), Gaps = 3/324 (1%) Strand=Plus/Plus Query 14 GGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTG 73 || |||||||||| |||||| || ||| ||||||||||||||||| | | |||| Sbjct 2690 GGAGTGAAATAGATCCTGAAACCATACGCTTACAAGCGGTCGGAGCCCTTTTGTGGGGTG 2749 Query 74 ACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCT 133 ||||||||||||||||||||||||||||||||||| || | || ||| |||| || Sbjct 2750 ACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAA-CGCTGCTGGCAAGGATAAGTACT 2808 Query 134 TCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCGCTA 192 ||||| | | ||| || ||||||||| || || |||||| ||| || | | || Sbjct 2809 TCAGGTATGG-ATCCGCAGCGAAAGCGAGTCTGAATAGGGCGCTTTAGTCAGTAGTGTTA 2867 Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAG 252 ||||||||||| ||||||||||||| | ||||||||||| | |||||| | ||||| Sbjct 2868 GACGCGAAACCGTGTGATCTACCCATGGGCAGGTTGAAGCTGTGGTAACACACAGTGGAG 2927 Query 253 GACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCA 312 |||||||||||| |||||||||||| |||||||||| | ||||||||||||||||||| Sbjct 2928 GACCGAACCGGTTGACGTTGAAAAGTCTTCGGATGACCTGTGGGTAGGGGTGAAAGGCCA 2987 Query 313 ATCAAACTGGGAAATAGCTCGTAC 336 |||||||| ||||||||||||||| Sbjct 2988 ATCAAACTCGGAAATAGCTCGTAC 3011 >seq1328 Length=80990 Score = 205 bits (226), Expect = 2e-50 Identities = 250/337 (74%), Gaps = 12/337 (4%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC--- 60 ||||| ||||| |||||| ||| |||||| ||| |||||||| | || |||||| Sbjct 1218 CCCGACAAGGGGAGTGAAAGAGATCCTGAAACCGAATGCCTACAAACAGTTGGAGCCCAA 1159 Query 61 GAGTGATTC--GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 || | ||| |||||| |||| ||||||| |||||| | | ||| |||||| | || | Sbjct 1158 GATTTGTTCTGGGTGACAGCGTACCTTTTGTATAATGGGTCAGCGACTTAGTC-TGACGA 1100 Query 119 GCGAGGTTAAGGGCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC 177 || || |||| | || || ||| || || ||||||||| || ||||||||| Sbjct 1099 GCAAGCTTAAA-----CCGGTAGGTGTAGGCGCAGCGAAAGCGAGTCTGAACAGGGCGTT 1045 Query 178 GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGG 237 |||| || | ||||| ||||||| |||||||| ||| ||||||||||||| || Sbjct 1044 CAGTTCGTCGGATTAGACCCGAAACCAAGTGATCTAGCCATGAGCAGGTTGAAGGTAAGG 985 Query 238 TAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGT 297 |||| | | |||||||||||||| | | |||| || || |||||||| | || | Sbjct 984 TAACACTTACTGGAGGACCGAACCCGCATCTGTTGCAATAGATTGGGATGACTTGTGGCT 925 Query 298 AGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||||||||| ||| |||||| || Sbjct 924 AGGGGTGAAAGGCCAATCAAACTTGGAGATAGCTGGT 888 >seq3111 Length=1418 Score = 187 bits (206), Expect = 5e-45 Identities = 238/325 (73%), Gaps = 7/325 (2%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGA-TTC 69 ||||| |||||||||| |||||| ||| || ||||||| || ||||| || | ||| Sbjct 80 AGGGGAGTGAAATAGATCCTGAAACCGTATGCGTACAAGCAGTGGGAGCAGACTTTGTTC 139 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 ||||| |||| ||||||| |||||| | | ||| ||| | ||| ||||| |||| Sbjct 140 TGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATTT-TCAGTGGCGAGCTTAAC 198 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | | || || || || ||||||||| ||||| |||||| | ||| | ||| Sbjct 199 CGAATAGGGG-----AGGCGTAGCGAAAGCGAGTCTTAATAGGGCGTCTAGTCGCTGGGA 253 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| | |||||| ||| | ||||||||||| |||||| | || Sbjct 254 ATAGACCCGAAACCGGGCGATCTATCCATGGGCAGGTTGAAGGTTGGGTAACACTAACTG 313 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 ||||||||||||| | |||||||||||| |||||||| | || | || |||||||| Sbjct 314 GAGGACCGAACCGACTACCGTTGAAAAGTTAGCGGATGACCTGTGGATCGGAGTGAAAGG 373 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 | |||||| || ||| |||||| || Sbjct 374 CTAATCAAGCTCGGAGATAGCTGGT 398 >seq2213 Length=1110 Score = 109 bits (120), Expect = 1e-21 Identities = 81/95 (85%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 14 GGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTG 73 || |||||||||| |||||| || ||| ||||||||||||||||| | | |||| Sbjct 1016 GGAGTGAAATAGATCCTGAAACCATACGCTTACAAGCGGTCGGAGCCCTTTTGTGGGGTG 1075 Query 74 ACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTA 108 ||||||||||||||||||||||||||||||||||| Sbjct 1076 ACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTA 1110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972669819904