Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq371 131 7e-28 >seq371 Length=13317 Score = 131 bits (144), Expect = 7e-28 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||||||||| | |||||||||||||| | ||||||||||| |||||| |||||||| Sbjct 7563 GGACCCGAAAGGTTGTGAACTATGCCTGTGAAAGGTGAAGCCAGTGGAAACACTGGTGGA 7622 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| | |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 7623 GGCTTGTAGCGGTACTGACGTGCAAATCGTTCGTCTGACATGGGTATAGGGGCGA 7677 Score = 77.0 bits (84), Expect = 1e-11 Identities = 95/127 (75%), Gaps = 6/127 (5%) Strand=Plus/Plus Query 49 TGTTTGGGAATGCA-GCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATAT---TGG 104 || ||| |||||| ||| | | ||||| || | |||| || ||||||||| | | Sbjct 6774 TGCTTGATAATGCATGCTGAAGACGGGAGTGAAGTCACTTCCAAGGCTAAATATCCTTAG 6833 Query 105 CCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGA 164 ||||||||||||| ||||||| |||| ||||| || |||| ||| || ||||||| Sbjct 6834 --AGAGACCGATAGCATACAAGTACTGTGAAGGAAAGGTGCAAAGAACTCTGAAAAGAGA 6891 Query 165 GTTAAAA 171 ||||||| Sbjct 6892 GTTAAAA 6898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079712956100