Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq3111 334 8e-90 seq2288 127 2e-27 >seq3111 Length=1418 Score = 334 bits (370), Expect = 8e-90 Identities = 190/193 (98%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1181 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 1122 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 120 ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1121 GATGACTCGTCATCAGCTCTCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 1062 Query 121 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1061 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 1002 Query 181 TTAACCAGAAGTA 193 |||||||||||| Sbjct 1001 ATAACCAGAAGTA 989 >seq2288 Length=2140 Score = 127 bits (140), Expect = 2e-27 Identities = 137/178 (77%), Gaps = 9/178 (5%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||||||||||| |||||||| ||||||| ||| |||| |||||| | | |||| Sbjct 1884 CTGAAGCTTAGGAGCTTTTCCTGGAAGCGTGGTATCAGTGACTTCGCCTT---AAAGG-- 1830 Query 65 ACTCGTCATCAGCTCCCGGCCTTA--GAATCCCGGATTTACCTAAGATTCCAGCCTACCA 122 |||||| || | | ||| |||| ||||||||||||| || ||||||| | |||||| Sbjct 1829 -CTCGTC-TCGGTGCTCGGTCTTAAAGAATCCCGGATTTGCCAAAGATTCAAACCTACCT 1772 Query 123 CCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||| | |||||||||||||| | |||| |||||||||||||||||||||| Sbjct 1771 CCTTTCCCCCGGACAACCAACGCCGGGTACACCTAACCTTCTCCGTCCCTCCATCGCA 1714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518332795596