Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017-
01-02] 13,382 sequences; 45,801,537 total letters
Query= AAMG01000345.1
Length=193
Score E
Sequences producing significant alignments: (Bits) Value
seq3111 334 8e-90
seq2288 127 2e-27
>seq3111
Length=1418
Score = 334 bits (370), Expect = 8e-90
Identities = 190/193 (98%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 1122
Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 120
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 GATGACTCGTCATCAGCTCTCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 1062
Query 121 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1061 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 1002
Query 181 TTAACCAGAAGTA 193
||||||||||||
Sbjct 1001 ATAACCAGAAGTA 989
>seq2288
Length=2140
Score = 127 bits (140), Expect = 2e-27
Identities = 137/178 (77%), Gaps = 9/178 (5%)
Strand=Plus/Minus
Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64
||||||||||| |||||||| ||||||| ||| |||| |||||| | | ||||
Sbjct 1884 CTGAAGCTTAGGAGCTTTTCCTGGAAGCGTGGTATCAGTGACTTCGCCTT---AAAGG-- 1830
Query 65 ACTCGTCATCAGCTCCCGGCCTTA--GAATCCCGGATTTACCTAAGATTCCAGCCTACCA 122
|||||| || | | ||| |||| ||||||||||||| || ||||||| | ||||||
Sbjct 1829 -CTCGTC-TCGGTGCTCGGTCTTAAAGAATCCCGGATTTGCCAAAGATTCAAACCTACCT 1772
Query 123 CCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180
|||| | |||||||||||||| | |||| ||||||||||||||||||||||
Sbjct 1771 CCTTTCCCCCGGACAACCAACGCCGGGTACACCTAACCTTCTCCGTCCCTCCATCGCA 1714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518332795596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |