Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq3111 257 2e-66 seq3527 205 1e-50 seq2288 150 2e-34 seq446 138 2e-30 seq445 132 7e-29 seq1328 122 1e-25 seq11326 89.7 7e-16 >seq3111 Length=1418 Score = 257 bits (284), Expect = 2e-66 Identities = 198/230 (86%), Gaps = 10/230 (4%) Strand=Plus/Minus Query 26 GTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTTTAGTAAACAGTC 85 |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| Sbjct 1418 GTCAGTCCGTATACATCGTCTTAC-GACTTCGCACGGACCTGTGTTTTTAGTAAACAGTC 1360 Query 86 GCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA------ACACGTCGTTCACCAG-CA 138 ||||| | || |||||||| || | |||||||| | | ||||| |||||| || Sbjct 1359 GCTTCTCACTGGTCTCTGCGGCCCCACCCAGCTCAGACAGTAAATGTCGT-CACCAGACA 1301 Query 139 GTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 | ||| ||||||||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct 1300 G-GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCATAGTTAT 1242 Query 199 CCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | ||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 1241 CTCGATCGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTGGGGTA 1192 >seq3527 Length=887 Score = 205 bits (226), Expect = 1e-50 Identities = 186/229 (81%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 26 GTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTTTAGTAAACAGTC 85 |||||||||||||||||| ||| | | ||| ||||||||||||||||||||||||||||| Sbjct 1 GTCAGTCCGTATACATCGTCTTGC-GACTTGGCACGGACCTGTGTTTTTAGTAAACAGTC 59 Query 86 GCTTCCCTCTATTCTCTGCGACCACCACCAGCT--CAACACGTCGTTCACCA---GCAGT 140 ||| ||| ||| |||||||| || ||| ||| | | || || | | || | Sbjct 60 GCTACCCACTAGTCTCTGCGGCCTCCAAACGCTTTCGGGA-GTAAATCCCTATACGCCGA 118 Query 141 -GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCAC 199 ||| ||||||||||||||||||||||| ||||||||||| |||||||||||| ||| | Sbjct 119 AGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGCCGAGTTCCTTAACCACGATTCTC 178 Query 200 CCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 ||| | |||| |||||||||||||||||||||| |||||||| |||| Sbjct 179 TCGATCTCCTTGGTATTCTCTACCTGACCACCTGAGTCGGTTTGGGGTA 227 >seq2288 Length=2140 Score = 150 bits (166), Expect = 2e-34 Identities = 181/244 (74%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67 ||||| |||||||||||||||| || ||||| || |||| | || || ||| | ||| Sbjct 2140 TTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGCTG 2082 Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA---CAC 124 ||||||| ||||||||||| | || | |||||| || | ||||| | | | Sbjct 2081 TGTTTTTGATAAACAGTCGCAGCGGCCTGGTTTCTGCGGCCCTCTTCAGCTATAGCTCGC 2022 Query 125 GTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCC 184 | ||||| | ||| | ||||||||||||||||||| ||||| ||||| | |||| Sbjct 2021 ATGAGCCACCAAAAAGGGCGCACCTTCTCCCGAAGTTACGGTGCCATGTTGCCTAGTTCC 1962 Query 185 TTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTAC 244 || ||| ||||| | | | ||||| || |||||| ||| |||||||||||||||||| Sbjct 1961 TTCACCCGAGTTCTCTCAAGCGCCTGAGAATTCTCATCCTACCCACCTGTGTCGGTTTAC 1902 Query 245 GGTA 248 |||| Sbjct 1901 GGTA 1898 >seq446 Length=116643 Score = 138 bits (152), Expect = 2e-30 Identities = 180/248 (73%), Gaps = 21/248 (8%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| || ||||| || ||| | | || ||| Sbjct 4247 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCTTATACTTCATCTTTCGATTTT-GCAA 4189 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | | ||||||||| ||||||||||| | || ||| ||||| ||| | Sbjct 4188 AGCCATGTGTTTTTGTTAAACAGTCGCCTGGGCCTTTTCACTGCG----------GCTGA 4139 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | | | |||||| ||||||||||||||||||| ||||||||||||||| Sbjct 4138 TA---TTGCT-ACCAGCG------CCCCTTCTCCCGAAGTTACAGGGCCATTTTGCCGAG 4089 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| ||| ||||| ||| | |||||| ||||||| || | |||||||||||| Sbjct 4088 TTCCTTAGCCATGATTCACTCGAGCACCTTAGAATTCTCTTCCCGGATACCTGTGTCGGT 4029 Query 241 TTACGGTA 248 || ||||| Sbjct 4028 TTGCGGTA 4021 >seq445 Length=5314 Score = 132 bits (146), Expect = 7e-29 Identities = 178/248 (72%), Gaps = 21/248 (8%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| || ||||| || ||||| | || ||| Sbjct 4033 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCATCTTACGATTTT-GCAG 3975 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| | || ||| ||||| ||| || ||| Sbjct 3974 AGCCCTGTGTTTTTGATAAACAGTCGCCTGGACCTTTTCACTGCGGCCAGCATT-GCT-- 3918 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 || |||| || ||||||||||||||| || | |||||||| || Sbjct 3917 ---------------GC--TGGCGACCTTTCTCCCGAAGTTACAGGTCTATTTTGCCTAA 3875 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| ||| || | ||| | |||||| ||||||| | || |||||||||||| Sbjct 3874 TTCCTTAGCCATGAATCTCTCGAGCACCTTAGGATTCTCTCCTCAACTACCTGTGTCGGT 3815 Query 241 TTACGGTA 248 |||||||| Sbjct 3814 TTACGGTA 3807 >seq1328 Length=80990 Score = 122 bits (134), Expect = 1e-25 Identities = 146/196 (74%), Gaps = 12/196 (6%) Strand=Plus/Plus Query 54 TTCGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCAC 113 |||||| | ||||||||||| ||||||||||||| ||| || ||| ||| ||| ||| Sbjct 1 TTCGCAGAGCCCTGTGTTTTTGGTAAACAGTCGCTACCCCCTGGTCTGTGCCACCCTCAC 60 Query 114 CAGCTCAACACGT-CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATT 172 | || | ||| || || | ||| | |||| ||||||||||| | || | Sbjct 61 -------ATACTTGCGTACATAAGG---GTCACGC-TTCTTCCGAAGTTACGCGTGCAAT 109 Query 173 TTGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCT 232 ||||||| |||||| | | |||||| | | | |||||| |||||||||||| | ||||| Sbjct 110 TTGCCGAGTTCCTTCAACGCAGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCA 169 Query 233 GTGTCGGTTTACGGTA 248 ||||||||||| |||| Sbjct 170 GTGTCGGTTTAGGGTA 185 >seq11326 Length=344 Score = 89.7 bits (98), Expect = 7e-16 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 147 CCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACG 206 |||| |||||||||||||| ||| |||||||| |||||| || ||||| | | | || Sbjct 115 CCTTTTCCCGAAGTTACGGTACCAATTTGCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCG 174 Query 207 CCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 |||||| || ||| | | |||||||||||||||| ||||| Sbjct 175 CCTTAGAATACTCATCTCGCCCACCTGTGTCGGTTTGCGGTA 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694309979286