Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq446 138 1e-30 seq445 134 1e-29 seq3111 89.7 5e-16 seq3527 87.8 2e-15 seq1328 82.4 8e-14 seq11326 78.8 1e-12 >seq446 Length=116643 Score = 138 bits (152), Expect = 1e-30 Identities = 138/175 (79%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| ||| |||| || || |||||| ||| |||||||||| || || Sbjct 4024 CGCAAACCGACACAGGTATCCGGGAAGAGAATTCTAAGGTGCTCGAGTGAATCATGGCTA 4083 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||||| |||||| || |||||||||||||||| ||||| | || || ||| | Sbjct 4084 AGGAACTCGGCAAAATGGCCCTGTAACTTCGGGA-GAAGGGGCGCT-GGTAGCAATATCA 4141 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||||| ||| ||| |||||| ||||||||||||||||||| |||| ||| || Sbjct 4142 -GCCGCAGTGAAAAGGCCCAGGCGACTGTTTAACAAAAACACATGGCTTTGCAAA 4195 >seq445 Length=5314 Score = 134 bits (148), Expect = 1e-29 Identities = 137/175 (78%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| ||||| | | || || |||||| ||| ||| || ||| || || Sbjct 3810 CGTAAACCGACACAGGTAGTTGAGGAGAGAATCCTAAGGTGCTCGAGAGATTCATGGCTA 3869 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||| |||||||| | ||||||||||||||| ||| |||| | | ||| ||| | Sbjct 3870 AGGAATTAGGCAAAATAGACCTGTAACTTCGGGAGAAA-GGTCGCCA-GCAGCAAT-GCT 3926 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||||| ||| |||||||||| |||||||| ||||||||||||||| ||| || Sbjct 3927 GGCCGCAGTGAAAAGGTCCAGGCGACTGTTTATCAAAAACACAGGGCTCTGCAAA 3981 >seq3111 Length=1418 Score = 89.7 bits (98), Expect = 5e-16 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || ||||||||||| | ||| || | ||||||| Sbjct 1197 CAAACCGACACAGGTGGTCAGGTAGAGAATACTAAGGCGATCGAGATAACTATGGTTAAG 1256 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||||| |||||| || ||| |||||||||||| || ||| Sbjct 1257 GAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 1295 >seq3527 Length=887 Score = 87.8 bits (96), Expect = 2e-15 Identities = 134/195 (69%), Gaps = 22/195 (11%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| ||| || || ||| ||| || |||| |||| | | ||| ||||| ||||||| Sbjct 222 CAAACCGACTCAGGTGGTCAGGTAGAGAATACCAAGGAGATCGAGAGAATCGTGGTTAAG 163 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTAC-------------- 129 ||||| |||||| || ||| |||||||||||| || ||| ||| | Sbjct 162 GAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGGGGCCTTCGGCGTATAGGGATT 103 Query 130 ----CCAGAAA----TGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAAC 181 || |||| | ||||| |||||||| ||| || |||||||| |||||| Sbjct 102 TACTCCCGAAAGCGTTTGGAGGCCGCAGAGACTAGTGGGTAGCGACTGTTTACTAAAAAC 43 Query 182 ACAGGGCTGTGCCAA 196 ||||| | ||||||| Sbjct 42 ACAGGTCCGTGCCAA 28 >seq1328 Length=80990 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| ||||| || | | ||| || |||| |||||||||||| ||| || | |||| Sbjct 179 AAACCGACACTGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACTGCGTTGAAGG 120 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 |||| |||||| || | |||||||||| | || | | ||| ||| || ||| Sbjct 119 AACTCGGCAAATTGCACGCGTAACTTCGGAAGAAGCGTGACCCTTATGTACGCAAGTATG 60 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| ||| ||| ||| || |||||||| ||||||||||||||| ||| || Sbjct 59 TGAGGGTGGCACAGACCAGGGGGTAGCGACTGTTTACCAAAAACACAGGGCTCTGCGAA 1 >seq11326 Length=344 Score = 78.8 bits (86), Expect = 1e-12 Identities = 78/100 (78%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| || | || | ||| ||| |||||||||||||| ||| || | Sbjct 213 CGCAAACCGACACAGGTGGGCGAGATGAGTATTCTAAGGCGCTTGAGAGAACTCGGGAGA 154 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGG 121 ||||||| |||||| || | |||||||||||| ||||| Sbjct 153 AGGAACTCGGCAAATTGGTACCGTAACTTCGGGA-AAAGG 115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531131136228